Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.79□□□□□ -1.64
CX3CR1P49238 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AP000859.1-201ENST00000525536 307 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AL499605.1-201ENST00000604628 403 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AC108865.2-201ENST00000606881 432 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CR1P49238 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.79□□□□□ -1.64
CX3CR1P49238 FRG1EP-201ENST00000634469 770 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 MIR193BHG-214ENST00000641765 509 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AC073869.8-201ENST00000641806 335 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AC008691.1-209ENST00000642094 814 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CR1P49238 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CR1P49238 YES1P1-201ENST00000418510 1628 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 LINC01963-201ENST00000562038 3148 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 AC100757.1-201ENST00000616872 1835 ntBASIC4.79□□□□□ -1.64
CX3CR1P49238 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CR1P49238 OR9K1P-201ENST00000326513 941 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AC107977.1-201ENST00000355745 939 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 RN7SKP6-201ENST00000364795 319 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CR1P49238 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 GAPDHP42-201ENST00000406848 981 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AL133173.1-201ENST00000423458 397 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AKR1B10P1-201ENST00000425765 942 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 OR6D1P-201ENST00000436165 939 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 AC021193.1-201ENST00000511607 420 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC098976.1-201ENST00000513014 541 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 CYCSP22-201ENST00000517555 339 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 OR8A2P-201ENST00000528631 952 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC005363.1-201ENST00000530779 351 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 RBM22P12-201ENST00000567098 1255 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AP000769.2-201ENST00000602344 396 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC009237.13-201ENST00000603193 276 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AC108738.1-201ENST00000603703 237 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.78□□□□□ -1.64
CX3CR1P49238 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CX3CR1P49238 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CX3CR1P49238 RNF19BPY-201ENST00000458209 1550 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.78□□□□□ -1.64
CX3CR1P49238 AL603750.1-201ENST00000624216 1717 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC104623.2-202ENST00000623477 4002 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 AC003973.3-201ENST00000624863 2822 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CX3CR1P49238 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CX3CR1P49238 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.77□□□□□ -1.65
CX3CR1P49238 CXADRP1-201ENST00000398098 1095 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 GAPDHP15-201ENST00000398586 975 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 LYPLA1P3-201ENST00000402650 695 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 AC098592.2-201ENST00000413158 265 ntBASIC4.77□□□□□ -1.65
CX3CR1P49238 EEF1B2P8-201ENST00000414101 671 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms