Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXD13P35453 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 AC023271.1-201ENST00000445936 1090 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXD13P35453 IGBP1P3-201ENST00000447449 1000 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC117394.1-201ENST00000477323 567 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXD13P35453 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 AC109481.1-201ENST00000509173 282 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 RNU6-760P-201ENST00000516078 97 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 SCARNA20.4-201ENST00000516969 131 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXD13P35453 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXD13P35453 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 AC104695.2-201ENST00000605056 775 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXD13P35453 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 AC007620.3-201ENST00000608131 497 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC010632.3-201ENST00000611377 369 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC009032.1-201ENST00000617574 431 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC026124.2-201ENST00000621847 656 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC021766.1-201ENST00000624404 741 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXD13P35453 AP001284.1-201ENST00000528393 2118 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 AC007342.5-201ENST00000571340 2142 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXD13P35453 AL353796.1-201ENST00000561542 3241 ntBASIC6.02□□□□□ -1.45
HOXD13P35453 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXD13P35453 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXD13P35453 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXD13P35453 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXD13P35453 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXD13P35453 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXD13P35453 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 AC003973.3-201ENST00000624863 2822 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXD13P35453 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 MIR551A-201ENST00000385042 96 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 RN7SKP286-201ENST00000410894 299 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXD13P35453 TNPO1P1-201ENST00000423641 1138 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXD13P35453 HMGB3P10-201ENST00000434734 572 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 AL157884.3-201ENST00000448273 1184 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 RBMY2TP-201ENST00000451162 947 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 AL358876.1-201ENST00000453364 1075 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 YWHAEP1-201ENST00000453697 763 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 RPL35AP19-201ENST00000469425 329 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.01□□□□□ -1.45
HOXD13P35453 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXD13P35453 AC098799.1-201ENST00000504752 800 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXD13P35453 RNU6-491P-201ENST00000516099 110 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 TMEM97P2-201ENST00000517841 403 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 AC016839.1-201ENST00000578162 867 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 SNORD95-201ENST00000579879 68 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.01□□□□□ -1.45
HOXD13P35453 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXD13P35453 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXD13P35453 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXD13P35453 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXD13P35453 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXD13P35453 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXD13P35453 ATP5A1P1-201ENST00000454088 1321 ntBASIC6□□□□□ -1.45
HOXD13P35453 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HOXD13P35453 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6□□□□□ -1.45
HOXD13P35453 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HOXD13P35453 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6□□□□□ -1.45
HOXD13P35453 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6□□□□□ -1.45
HOXD13P35453 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXD13P35453 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6□□□□□ -1.45
HOXD13P35453 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HOXD13P35453 ZSCAN12P1-201ENST00000406489 419 ntBASIC6□□□□□ -1.45
HOXD13P35453 OR2AT2P-201ENST00000413438 905 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms