Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.3□□□□□ -1.56
RORAP35398 AC025574.2-201ENST00000615621 514 ntBASIC5.3□□□□□ -1.56
RORAP35398 AL118522.2-201ENST00000616045 615 ntBASIC5.3□□□□□ -1.56
RORAP35398 MIR6837-201ENST00000620884 64 ntBASIC5.3□□□□□ -1.56
RORAP35398 MIR6719-201ENST00000622428 87 ntBASIC5.3□□□□□ -1.56
RORAP35398 PWAR1-201ENST00000624188 2414 ntBASIC5.3□□□□□ -1.56
RORAP35398 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.3□□□□□ -1.56
RORAP35398 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.29□□□□□ -1.56
RORAP35398 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RORAP35398 MRRFP1-201ENST00000435941 1675 ntBASIC5.29□□□□□ -1.56
RORAP35398 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 GAPDHP24-201ENST00000328713 983 ntBASIC5.29□□□□□ -1.56
RORAP35398 RNA5SP183-201ENST00000362452 119 ntBASIC5.29□□□□□ -1.56
RORAP35398 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RORAP35398 RNU1-136P-201ENST00000384181 164 ntBASIC5.29□□□□□ -1.56
RORAP35398 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RORAP35398 AP000534.2-201ENST00000412729 568 ntBASIC5.29□□□□□ -1.56
RORAP35398 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.29□□□□□ -1.56
RORAP35398 AL034379.1-201ENST00000423216 253 ntBASIC5.29□□□□□ -1.56
RORAP35398 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.29□□□□□ -1.56
RORAP35398 CYCSP12-201ENST00000437729 300 ntBASIC5.29□□□□□ -1.56
RORAP35398 ARAFP2-201ENST00000440565 559 ntBASIC5.29□□□□□ -1.56
RORAP35398 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.29□□□□□ -1.56
RORAP35398 SERPINA7P1-201ENST00000443077 631 ntBASIC5.29□□□□□ -1.56
RORAP35398 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 RN7SL51P-201ENST00000468230 285 ntBASIC5.29□□□□□ -1.56
RORAP35398 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 ST13P12-201ENST00000508958 1094 ntBASIC5.29□□□□□ -1.56
RORAP35398 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.29□□□□□ -1.56
RORAP35398 IGLV2-28-201ENST00000520681 304 ntBASIC5.29□□□□□ -1.56
RORAP35398 OR4A43P-201ENST00000532938 908 ntBASIC5.29□□□□□ -1.56
RORAP35398 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RORAP35398 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.29□□□□□ -1.56
RORAP35398 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.29□□□□□ -1.56
RORAP35398 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.29□□□□□ -1.56
RORAP35398 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 AL138820.1-201ENST00000617901 5305 ntBASIC5.29□□□□□ -1.56
RORAP35398 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.29□□□□□ -1.56
RORAP35398 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RORAP35398 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 AL590763.1-201ENST00000398297 1545 ntBASIC5.28□□□□□ -1.56
RORAP35398 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.28□□□□□ -1.56
RORAP35398 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.28□□□□□ -1.56
RORAP35398 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 SNORA79B-201ENST00000410557 148 ntBASIC5.28□□□□□ -1.56
RORAP35398 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.28□□□□□ -1.56
RORAP35398 Z93019.1-201ENST00000416450 973 ntBASIC5.28□□□□□ -1.56
RORAP35398 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 AL627308.1-201ENST00000435693 821 ntBASIC5.28□□□□□ -1.56
RORAP35398 AL596266.1-201ENST00000448132 400 ntBASIC5.28□□□□□ -1.56
RORAP35398 RPL7P45-201ENST00000455851 743 ntBASIC5.28□□□□□ -1.56
RORAP35398 OR2AO1P-201ENST00000476497 403 ntBASIC5.28□□□□□ -1.56
RORAP35398 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.28□□□□□ -1.56
RORAP35398 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.28□□□□□ -1.56
RORAP35398 AL358913.1-201ENST00000554342 121 ntBASIC5.28□□□□□ -1.56
RORAP35398 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 DHFRP1-201ENST00000579682 559 ntBASIC5.28□□□□□ -1.56
RORAP35398 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.28□□□□□ -1.56
RORAP35398 AC016252.1-201ENST00000609721 474 ntBASIC5.28□□□□□ -1.56
RORAP35398 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
RORAP35398 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.28□□□□□ -1.56
RORAP35398 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RORAP35398 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 PABPC1P6-201ENST00000445594 1829 ntBASIC5.27□□□□□ -1.57
RORAP35398 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms