Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL390879.1-201ENST00000439143 386 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.65□□□□□ -1.34
TM4SF1P30408 KNOP1P3-201ENST00000446933 426 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AL513533.1-201ENST00000453728 415 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 HMGN2P25-201ENST00000486956 268 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 BTF3P13-201ENST00000513224 490 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TM4SF1P30408 RAB9BP1-201ENST00000519581 626 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
TM4SF1P30408 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.65□□□□□ -1.34
TM4SF1P30408 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.65□□□□□ -1.34
TM4SF1P30408 OR11H3P-201ENST00000554547 982 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.65□□□□□ -1.34
TM4SF1P30408 RN7SL356P-201ENST00000582228 248 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AC079791.1-201ENST00000605356 973 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AL023583.1-201ENST00000607518 1143 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AL161616.1-201ENST00000611867 286 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AC135068.5-201ENST00000624197 983 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 AC073869.10-201ENST00000642016 354 ntBASIC6.65□□□□□ -1.34
TM4SF1P30408 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
TM4SF1P30408 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TM4SF1P30408 AC007996.1-201ENST00000620414 2821 ntBASIC6.65□□□□□ -1.35
TM4SF1P30408 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TM4SF1P30408 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
TM4SF1P30408 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TM4SF1P30408 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF1P30408 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC009779.8-201ENST00000641684 4384 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF1P30408 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TM4SF1P30408 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC079741.1-201ENST00000321498 212 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 RN7SKP113-201ENST00000363891 295 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TM4SF1P30408 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 NPM1P40-201ENST00000412758 733 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 DDX39BP1-205ENST00000422507 192 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 RPL7P56-201ENST00000429441 717 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF1P30408 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF1P30408 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC025423.2-201ENST00000537570 439 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 EIF1AXP2-201ENST00000555940 413 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC068790.4-201ENST00000602474 263 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 AL031320.1-201ENST00000604177 357 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 AC243960.7-201ENST00000623532 707 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 AC007342.9-201ENST00000623877 1385 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 NXF4-202ENST00000416098 1465 ntBASIC6.64□□□□□ -1.35
TM4SF1P30408 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF1P30408 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.63□□□□□ -1.35
TM4SF1P30408 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 AC016251.2-201ENST00000623393 3089 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF1P30408 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TM4SF1P30408 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 GNG5P2-201ENST00000372054 207 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 RPL11P3-201ENST00000395256 523 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 HSPA8P15-201ENST00000401676 786 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 AC019050.1-201ENST00000418508 492 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 NDUFA5P8-201ENST00000449019 346 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 MORF4L2P1-201ENST00000503761 858 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 UGT2B24P-201ENST00000514441 1597 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 HNRNPRP2-201ENST00000528421 743 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TM4SF1P30408 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF1P30408 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF1P30408 AC008147.3-201ENST00000548666 354 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF1P30408 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 AC005252.1-201ENST00000604518 1063 ntBASIC6.63□□□□□ -1.35
TM4SF1P30408 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF1P30408 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF1P30408 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
TM4SF1P30408 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms