Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.85□□□□□ -1.63
CD40LGP29965 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40LGP29965 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40LGP29965 AC105036.1-201ENST00000566222 271 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 AC022884.2-201ENST00000578535 580 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40LGP29965 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40LGP29965 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 AL139099.4-201ENST00000614802 114 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 AC025262.3-201ENST00000623666 360 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40LGP29965 AL357140.4-201ENST00000636827 412 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40LGP29965 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.85□□□□□ -1.63
CD40LGP29965 OR11H2-202ENST00000641517 1085 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
CD40LGP29965 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 AL034370.1-201ENST00000397254 1590 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 HSPD1P9-201ENST00000420325 1636 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 AL513548.1-201ENST00000562904 1724 ntBASIC4.85□□□□□ -1.63
CD40LGP29965 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40LGP29965 LINC01355-201ENST00000566551 5444 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 AC090181.3-201ENST00000624777 1514 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD40LGP29965 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD40LGP29965 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD40LGP29965 AL157702.1-201ENST00000398764 426 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40LGP29965 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40LGP29965 AC046176.1-201ENST00000435260 1170 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 SEPT14P12-201ENST00000442280 560 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 CBX1P5-201ENST00000475330 559 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AC092865.4-201ENST00000477936 615 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40LGP29965 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AC073358.1-201ENST00000505671 684 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40LGP29965 RN7SKP34-201ENST00000516142 244 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 SCARNA20.4-201ENST00000516969 131 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AC116917.1-201ENST00000520558 305 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AP003396.4-201ENST00000527574 265 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 AP002373.2-201ENST00000541631 1060 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40LGP29965 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40LGP29965 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40LGP29965 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40LGP29965 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40LGP29965 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 uc_338.29-201ENST00000615099 168 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.84□□□□□ -1.63
CD40LGP29965 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40LGP29965 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40LGP29965 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD40LGP29965 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.84□□□□□ -1.64
CD40LGP29965 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 RNU1-134P-201ENST00000362935 165 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 RNA5SP232-201ENST00000364144 119 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 RN7SKP199-201ENST00000410325 305 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 RPSAP35-201ENST00000413753 818 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC090018.1-201ENST00000434369 367 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 RPL5P7-201ENST00000444235 813 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AL596266.1-201ENST00000448132 400 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms