Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.02□□□□□ -0.97
TOP2AP11388 NMNAT1P1-201ENST00000554095 876 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 AP001357.1-201ENST00000586304 1053 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9.02□□□□□ -0.97
TOP2AP11388 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.02□□□□□ -0.97
TOP2AP11388 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC9.02□□□□□ -0.97
TOP2AP11388 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 AC009779.8-201ENST00000641684 4384 ntBASIC9.02□□□□□ -0.97
TOP2AP11388 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
TOP2AP11388 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC9.02□□□□□ -0.97
TOP2AP11388 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
TOP2AP11388 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 USP8-204ENST00000425032 3559 ntTSL 2 BASIC9.01□□□□□ -0.97
TOP2AP11388 AL355488.2-201ENST00000609909 2850 ntBASIC9.01□□□□□ -0.97
TOP2AP11388 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC9.01□□□□□ -0.97
TOP2AP11388 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC9.01□□□□□ -0.97
TOP2AP11388 TPT1P12-201ENST00000448968 492 ntBASIC9.01□□□□□ -0.97
TOP2AP11388 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.01□□□□□ -0.97
TOP2AP11388 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC9.01□□□□□ -0.97
TOP2AP11388 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC9.01□□□□□ -0.97
TOP2AP11388 IMPA1P1-201ENST00000510718 842 ntBASIC9.01□□□□□ -0.97
TOP2AP11388 HMGN1P9-201ENST00000515212 298 ntBASIC9.01□□□□□ -0.97
TOP2AP11388 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC9.01□□□□□ -0.97
TOP2AP11388 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
TOP2AP11388 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC9.01□□□□□ -0.97
TOP2AP11388 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
TOP2AP11388 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
TOP2AP11388 AC079298.1-201ENST00000625026 1619 ntBASIC9.01□□□□□ -0.97
TOP2AP11388 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.01□□□□□ -0.97
TOP2AP11388 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
TOP2AP11388 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC9.01□□□□□ -0.97
TOP2AP11388 RNA5SP191-201ENST00000362585 102 ntBASIC9□□□□□ -0.97
TOP2AP11388 OR8V1P-201ENST00000395193 873 ntBASIC9□□□□□ -0.97
TOP2AP11388 NDUFB4P8-201ENST00000435351 367 ntBASIC9□□□□□ -0.97
TOP2AP11388 PRPF38AP2-201ENST00000438179 851 ntBASIC9□□□□□ -0.97
TOP2AP11388 AC006967.1-201ENST00000467608 589 ntBASIC9□□□□□ -0.97
TOP2AP11388 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC9□□□□□ -0.97
TOP2AP11388 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC9□□□□□ -0.97
TOP2AP11388 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC9□□□□□ -0.97
TOP2AP11388 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC9□□□□□ -0.97
TOP2AP11388 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
TOP2AP11388 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
TOP2AP11388 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
TOP2AP11388 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
TOP2AP11388 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
TOP2AP11388 SNORA70.9-201ENST00000384370 135 ntBASIC9□□□□□ -0.97
TOP2AP11388 AL590399.2-201ENST00000427536 309 ntBASIC9□□□□□ -0.97
TOP2AP11388 TCEA1P1-201ENST00000449716 880 ntBASIC9□□□□□ -0.97
TOP2AP11388 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9□□□□□ -0.97
TOP2AP11388 MORF4L1P3-201ENST00000525966 950 ntBASIC9□□□□□ -0.97
TOP2AP11388 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC9□□□□□ -0.97
TOP2AP11388 AC008147.3-201ENST00000548666 354 ntBASIC9□□□□□ -0.97
TOP2AP11388 AC084824.2-201ENST00000548906 345 ntBASIC9□□□□□ -0.97
TOP2AP11388 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9□□□□□ -0.97
TOP2AP11388 AC098935.2-201ENST00000604222 466 ntBASIC9□□□□□ -0.97
TOP2AP11388 BNIP3P35-201ENST00000604530 490 ntBASIC9□□□□□ -0.97
TOP2AP11388 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC9□□□□□ -0.97
TOP2AP11388 MIR6839-201ENST00000620425 113 ntBASIC9□□□□□ -0.97
TOP2AP11388 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9□□□□□ -0.97
TOP2AP11388 CR381572.2-201ENST00000624852 397 ntBASIC9□□□□□ -0.97
TOP2AP11388 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
TOP2AP11388 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TOP2AP11388 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
TOP2AP11388 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TOP2AP11388 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
TOP2AP11388 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TOP2AP11388 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.99□□□□□ -0.97
TOP2AP11388 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.99□□□□□ -0.97
TOP2AP11388 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 RNU2-50P-201ENST00000410494 143 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 AC011005.3-201ENST00000491624 395 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 AC005412.2-201ENST00000492004 341 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 IGBP1P4-201ENST00000503202 879 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC8.99□□□□□ -0.97
TOP2AP11388 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.99□□□□□ -0.97
TOP2AP11388 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.99□□□□□ -0.97
TOP2AP11388 EIF1P5-201ENST00000585002 234 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 uc_338.7-201ENST00000621834 124 ntBASIC8.99□□□□□ -0.97
TOP2AP11388 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
TOP2AP11388 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms