Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.92□□□□□ -1.46
CHRNA1P02708 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 PA2G4P6-201ENST00000438325 1197 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 AC090114.3-201ENST00000479267 829 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 RPS4XP20-201ENST00000505751 772 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 RN7SKP66-201ENST00000516681 231 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 AC122688.1-201ENST00000541494 223 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.92□□□□□ -1.46
CHRNA1P02708 AC005341.1-201ENST00000571086 708 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.92□□□□□ -1.46
CHRNA1P02708 MIR6748-201ENST00000610433 71 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 AL049539.1-201ENST00000611964 459 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
CHRNA1P02708 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA1P02708 AC140134.1-201ENST00000511830 3544 ntBASIC5.92□□□□□ -1.46
CHRNA1P02708 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA1P02708 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA1P02708 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA1P02708 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 SNORA17.1-201ENST00000362945 126 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHRNA1P02708 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHRNA1P02708 AL445213.1-201ENST00000412589 747 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 AC093162.1-201ENST00000419682 124 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 RPL12P17-201ENST00000432393 498 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 AC013410.1-201ENST00000436223 1232 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHRNA1P02708 AC090589.1-201ENST00000473109 362 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 RPS17P5-201ENST00000498293 408 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 RNU6-1334P-201ENST00000516032 105 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.91□□□□□ -1.46
CHRNA1P02708 AP000769.2-201ENST00000602344 396 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 AC112255.1-201ENST00000624070 2493 ntBASIC5.91□□□□□ -1.46
CHRNA1P02708 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.91□□□□□ -1.46
CHRNA1P02708 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHRNA1P02708 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
CHRNA1P02708 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA1P02708 AC114947.2-201ENST00000565748 2125 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA1P02708 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CHRNA1P02708 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CHRNA1P02708 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA1P02708 RN7SKP216-201ENST00000411050 312 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 Y_RNA.625-201ENST00000411256 107 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 RIMKLBP2-201ENST00000424737 654 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 AC092651.1-201ENST00000426110 312 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA1P02708 RPL7P56-201ENST00000429441 717 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 RPS11P7-201ENST00000442125 465 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AC009127.1-201ENST00000467090 155 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 SNRPCP3-201ENST00000474888 476 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 AC135999.1-201ENST00000478962 479 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 AC109464.1-201ENST00000511091 819 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 CDH12P4-201ENST00000517835 295 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 CDH12P3-201ENST00000517935 295 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 CDH12P1-201ENST00000518435 295 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AP000676.2-201ENST00000529711 301 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 YWHABP2-201ENST00000540201 713 ntBASIC5.9□□□□□ -1.46
CHRNA1P02708 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CHRNA1P02708 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.9□□□□□ -1.46
CHRNA1P02708 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA1P02708 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms