Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
APOC1P02654 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC1P02654 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC1P02654 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC1P02654 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC1P02654 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
APOC1P02654 SNORA64.1-201ENST00000362600 132 ntBASIC4.84□□□□□ -1.63
APOC1P02654 RN7SKP6-201ENST00000364795 319 ntBASIC4.84□□□□□ -1.63
APOC1P02654 VN1R12P-201ENST00000403778 876 ntBASIC4.84□□□□□ -1.63
APOC1P02654 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC1P02654 RPL34P3-201ENST00000421454 338 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC007161.1-204ENST00000423039 460 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 RPL12P17-201ENST00000432393 498 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC011476.1-201ENST00000466725 307 ntBASIC4.84□□□□□ -1.63
APOC1P02654 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC1P02654 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC1P02654 RN7SKP70-201ENST00000516655 271 ntBASIC4.84□□□□□ -1.63
APOC1P02654 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC1P02654 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.84□□□□□ -1.63
APOC1P02654 IGLV3-30-201ENST00000524362 298 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC1P02654 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC1P02654 AC084759.1-201ENST00000561168 290 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC079315.1-201ENST00000602952 623 ntBASIC4.84□□□□□ -1.63
APOC1P02654 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC1P02654 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 AF117829.2-201ENST00000619538 361 ntBASIC4.84□□□□□ -1.63
APOC1P02654 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.84□□□□□ -1.63
APOC1P02654 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC1P02654 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC1P02654 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
APOC1P02654 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.84□□□□□ -1.64
APOC1P02654 AC027228.2-201ENST00000567141 2154 ntBASIC4.84□□□□□ -1.64
APOC1P02654 DDX18P6-201ENST00000450119 1997 ntBASIC4.84□□□□□ -1.64
APOC1P02654 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOC1P02654 AL513548.1-201ENST00000562904 1724 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC1P02654 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOC1P02654 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC1P02654 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC1P02654 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 RNA5SP131-201ENST00000365452 119 ntBASIC4.83□□□□□ -1.64
APOC1P02654 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 EEF1B2P8-201ENST00000414101 671 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC1P02654 AL358176.3-201ENST00000420757 454 ntBASIC4.83□□□□□ -1.64
APOC1P02654 BX323845.3-201ENST00000428215 527 ntBASIC4.83□□□□□ -1.64
APOC1P02654 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 AC016772.1-201ENST00000444170 1261 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC005297.1-201ENST00000444765 862 ntBASIC4.83□□□□□ -1.64
APOC1P02654 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC1P02654 RPL7L1P1-201ENST00000448259 785 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC1P02654 YRDCP3-201ENST00000456507 480 ntBASIC4.83□□□□□ -1.64
APOC1P02654 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC1P02654 NIP7P2-201ENST00000485801 544 ntBASIC4.83□□□□□ -1.64
APOC1P02654 RPS24P16-201ENST00000497294 392 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC091912.1-201ENST00000511351 248 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC114781.3-201ENST00000512083 142 ntBASIC4.83□□□□□ -1.64
APOC1P02654 Vault.2-201ENST00000516519 98 ntBASIC4.83□□□□□ -1.64
APOC1P02654 MRPS16P1-201ENST00000523462 412 ntBASIC4.83□□□□□ -1.64
APOC1P02654 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 HSPE1P2-201ENST00000554777 306 ntBASIC4.83□□□□□ -1.64
APOC1P02654 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC1P02654 AC025574.2-201ENST00000615621 514 ntBASIC4.83□□□□□ -1.64
APOC1P02654 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
APOC1P02654 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
APOC1P02654 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC1P02654 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC1P02654 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
APOC1P02654 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
APOC1P02654 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC1P02654 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC1P02654 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC1P02654 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
APOC1P02654 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC1P02654 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
APOC1P02654 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 409.7 ms