Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 RPS23P7-201ENST00000466210 444 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC097484.1-201ENST00000471148 389 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC007537.2-201ENST00000472093 511 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 AL121594.2-201ENST00000541658 472 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 AL049779.3-201ENST00000557141 606 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RAPGEF3O95398 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RAPGEF3O95398 CDY5P-201ENST00000411487 1580 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 CDY9P-201ENST00000451397 1580 ntBASIC8.17□□□□□ -1.1
RAPGEF3O95398 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RAPGEF3O95398 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RAPGEF3O95398 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 CHEK2P3-201ENST00000416118 248 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 USP8-204ENST00000425032 3559 ntTSL 2 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 THAP12P8-201ENST00000447914 2115 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 RPS7P6-201ENST00000485777 579 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 ATG10-AS1-201ENST00000504846 648 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC073581.1-201ENST00000519036 575 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 TOMM20P2-201ENST00000540082 421 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 PCA3_2.1-201ENST00000612507 409 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.16□□□□□ -1.1
RAPGEF3O95398 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RAPGEF3O95398 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RAPGEF3O95398 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RAPGEF3O95398 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RAPGEF3O95398 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 Y_RNA.126-201ENST00000363382 111 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 RNA5SP455-201ENST00000365190 119 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 MIR23A-201ENST00000385245 73 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 RNA5SP91-201ENST00000390902 119 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 RPSAP35-201ENST00000413753 818 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AL590762.3-201ENST00000436372 640 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 CYCSP42-201ENST00000450823 238 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AL353718.1-201ENST00000451028 517 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RAPGEF3O95398 MTND3P24-201ENST00000506306 329 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AP003049.1-201ENST00000529418 457 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 AL110118.1-201ENST00000553543 400 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AL139022.2-201ENST00000606934 443 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 AC069542.2-201ENST00000624816 216 ntBASIC8.15□□□□□ -1.1
RAPGEF3O95398 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RAPGEF3O95398 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RAPGEF3O95398 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.15□□□□□ -1.1
RAPGEF3O95398 AC005224.3-201ENST00000584683 2140 ntBASIC8.15□□□□□ -1.11
RAPGEF3O95398 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RAPGEF3O95398 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RAPGEF3O95398 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RAPGEF3O95398 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RAPGEF3O95398 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RAPGEF3O95398 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RAPGEF3O95398 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL512283.1-201ENST00000606756 1384 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 AL512504.1-201ENST00000415494 778 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.14□□□□□ -1.11
RAPGEF3O95398 HSPD1P12-201ENST00000429127 1069 ntBASIC8.14□□□□□ -1.11
RAPGEF3O95398 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms