Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC006210.2-201ENST00000367074 1545 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 AC104966.1-201ENST00000467010 1464 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 SCARNA15-201ENST00000607520 4325 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC005294.1-201ENST00000355509 281 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.24□□□□□ -1.73
SSSCA1O60232 RNA5SP477-201ENST00000362639 119 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 UBBP2-201ENST00000376781 231 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 AL390316.1-201ENST00000406279 553 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 MIR1203-201ENST00000408812 85 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.24□□□□□ -1.73
SSSCA1O60232 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 AC079168.1-201ENST00000458741 345 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 ACA64.1-201ENST00000459171 127 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AL591473.1-201ENST00000464297 313 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC005165.2-201ENST00000466070 380 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RPL5P22-201ENST00000480199 884 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC058823.1-201ENST00000485315 474 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RN7SL423P-201ENST00000486202 304 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RN7SL447P-201ENST00000494711 245 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RNU6-615P-201ENST00000516065 106 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RNU2-45P-201ENST00000516068 187 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 RN7SKP99-201ENST00000517028 307 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC116917.1-201ENST00000520558 305 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.24□□□□□ -1.73
SSSCA1O60232 OR4A41P-201ENST00000533053 928 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC005341.1-201ENST00000571086 708 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSSCA1O60232 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.24□□□□□ -1.73
SSSCA1O60232 AL162431.4-201ENST00000604674 411 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.24□□□□□ -1.73
SSSCA1O60232 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 LYARP1-201ENST00000436977 1501 ntBASIC4.24□□□□□ -1.73
SSSCA1O60232 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SSSCA1O60232 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.24□□□□□ -1.73
SSSCA1O60232 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SSSCA1O60232 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSSCA1O60232 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.23□□□□□ -1.73
SSSCA1O60232 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SSSCA1O60232 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSSCA1O60232 AC114786.1-201ENST00000512892 1415 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSSCA1O60232 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSSCA1O60232 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SSSCA1O60232 RN7SKP250-201ENST00000363924 321 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSSCA1O60232 SNORA16A-201ENST00000384342 137 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 OR7E101P-201ENST00000400428 513 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 CLUHP1-201ENST00000435012 1190 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 BTF3P6-201ENST00000448054 499 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AL035090.1-201ENST00000454835 332 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AC093166.2-201ENST00000455969 1017 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.23□□□□□ -1.73
SSSCA1O60232 AC091874.2-201ENST00000505889 720 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 NACAP5-201ENST00000509863 636 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AP000648.1-201ENST00000529682 397 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.23□□□□□ -1.73
SSSCA1O60232 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.23□□□□□ -1.73
SSSCA1O60232 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.23□□□□□ -1.73
SSSCA1O60232 AL031601.1-201ENST00000605702 394 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.23□□□□□ -1.73
SSSCA1O60232 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AL118522.2-201ENST00000616045 615 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.23□□□□□ -1.73
SSSCA1O60232 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSSCA1O60232 PROS2P-201ENST00000474651 1951 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 AC107068.1-201ENST00000563286 4218 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.23□□□□□ -1.73
SSSCA1O60232 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC007996.1-201ENST00000620414 2821 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.22□□□□□ -1.73
SSSCA1O60232 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSSCA1O60232 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 LINC01963-201ENST00000562038 3148 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.22□□□□□ -1.73
SSSCA1O60232 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SSSCA1O60232 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms