Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN5O00501 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN5O00501 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 SPTLC1P2-201ENST00000407089 121 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 RNU4-34P-201ENST00000410431 124 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN5O00501 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 AC005033.1-201ENST00000428904 813 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN5O00501 TAAR4P-201ENST00000454843 1039 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 BX284632.1-201ENST00000478218 541 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 OR5M14P-201ENST00000506803 618 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN5O00501 RN7SKP5-201ENST00000517045 272 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN5O00501 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN5O00501 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN5O00501 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN5O00501 AL138960.1-201ENST00000613838 513 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 AL157762.1-201ENST00000619612 415 ntBASIC5.6□□□□□ -1.51
CLDN5O00501 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN5O00501 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN5O00501 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN5O00501 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN5O00501 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CLDN5O00501 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN5O00501 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 TTC41P-205ENST00000551270 3963 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 RN7SKP145-201ENST00000363291 303 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN5O00501 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC023271.1-201ENST00000445936 1090 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 MYO5BP2-201ENST00000449815 1277 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC026348.1-201ENST00000462549 1053 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC009127.1-201ENST00000467090 155 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 RPL7P40-201ENST00000481703 745 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 RPS26P24-201ENST00000497656 331 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC130364.2-201ENST00000528639 604 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 HAUS8P1-201ENST00000549005 542 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN5O00501 AC010632.3-201ENST00000611377 369 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC090527.3-201ENST00000619041 548 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC241377.1-201ENST00000619797 406 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 AC018445.2-201ENST00000622987 260 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 MTCO1P1-201ENST00000624263 1081 ntBASIC5.59□□□□□ -1.51
CLDN5O00501 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN5O00501 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN5O00501 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN5O00501 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN5O00501 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN5O00501 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN5O00501 AC092747.4-201ENST00000620519 1861 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms