Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SMIM12P1-201ENST00000603004 274 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AL713998.2-201ENST00000604538 1198 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC244107.2-201ENST00000611773 76 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 MIR8069-1-201ENST00000616627 86 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 MIR8069-2-201ENST00000621412 86 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 HCFC2P1-201ENST00000392864 1592 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MAPK10-349ENST00000641767 3661 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC016739.1-201ENST00000405359 345 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC099535.1-201ENST00000408928 371 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP16-201ENST00000410180 299 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL357752.1-201ENST00000412817 349 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RPS6P23-201ENST00000413224 722 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RPSAP32-201ENST00000432681 526 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LINC00328-2P-201ENST00000436585 219 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 EEF1B2P3-201ENST00000447718 678 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC011225.1-201ENST00000457751 369 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC112206.1-201ENST00000468416 477 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 DUTP7-201ENST00000507982 486 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 HMGB1P19-201ENST00000517578 577 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC116917.1-201ENST00000520558 305 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AP001000.1-201ENST00000526843 742 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 OR4A41P-201ENST00000533053 928 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 OR8G3P-201ENST00000533406 921 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL358913.1-201ENST00000554342 121 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 OR11H3P-201ENST00000554547 982 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC121758.1-202ENST00000556917 658 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MIR3154-201ENST00000577829 84 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AP005136.2-201ENST00000583253 1049 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MIR6780B-201ENST00000610307 79 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC012676.3-201ENST00000614983 479 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MIR6823-201ENST00000622118 61 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AL122023.1-201ENST00000622847 530 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC135068.5-201ENST00000624197 983 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 LINC01613-201ENST00000561476 2780 ntBASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RBFOX3A6NFN3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AL672167.2-201ENST00000377164 879 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 RNU6-729P-201ENST00000384399 107 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms