Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 MIR105-2-201ENST00000385083 81 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 MIR223-201ENST00000385204 110 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 RNA5SP487-201ENST00000410186 122 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 RNU4-34P-201ENST00000410431 124 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 DPPA2P3-201ENST00000411853 655 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AL139148.1-201ENST00000427122 680 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AL590399.2-201ENST00000427536 309 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 RPL7P56-201ENST00000429441 717 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC245047.2-201ENST00000441060 530 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC079841.1-201ENST00000481228 950 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC012123.2-201ENST00000485809 248 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 RNA5SP92-201ENST00000516437 110 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 GTF2IP11-201ENST00000526931 420 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC060766.1-201ENST00000590824 627 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC109583.2-201ENST00000617367 129 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AP005435.3-201ENST00000531260 3198 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 AC009962.1-201ENST00000567327 3813 ntBASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCF1Q9UBD9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AL137058.3-201ENST00000624531 3099 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC109780.1-201ENST00000451768 1344 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AL355834.1-201ENST00000556602 3965 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 U3.10-201ENST00000364459 214 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 DPPA2P2-201ENST00000418220 897 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC244033.1-201ENST00000426826 870 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 FAM96AP1-201ENST00000430879 482 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 FAR2P1-206ENST00000449736 709 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 RN7SL515P-201ENST00000463999 297 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 RN7SL188P-201ENST00000469842 285 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 RN7SL222P-201ENST00000476452 299 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC093763.2-201ENST00000505334 1223 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC023389.2-201ENST00000580031 955 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC107993.1-201ENST00000591343 684 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 AC016769.4-201ENST00000616893 535 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 SAMMSON-227ENST00000642114 1199 ntBASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCF1Q9UBD9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLCF1Q9UBD9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCF1Q9UBD9 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms