Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-316P-201ENST00000391027 107 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 NANOGP4-201ENST00000427230 913 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC091862.1-201ENST00000438016 1100 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 RHEBP2-201ENST00000450289 600 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 PSAT1P4-201ENST00000466500 526 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 RPL31P58-201ENST00000469001 379 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 RN7SL836P-201ENST00000476140 296 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC008126.1-201ENST00000549019 480 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AL591767.3-201ENST00000554632 525 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC044913.1-201ENST00000557200 430 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC083899.3-201ENST00000603413 594 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 LSM1P2-201ENST00000604911 322 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AL450226.2-201ENST00000622913 439 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC005514.1-201ENST00000623521 208 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 FANCD2P2-201ENST00000437591 1400 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 CASC19-206ENST00000641028 1430 ntBASIC7.34□□□□□ -1.23
CNTN3Q9P232 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.34□□□□□ -1.23
CNTN3Q9P232 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CNTN3Q9P232 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.34□□□□□ -1.24
CNTN3Q9P232 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CNTN3Q9P232 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
CNTN3Q9P232 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CNTN3Q9P232 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC010132.4-201ENST00000569883 1368 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC123769.2-201ENST00000624332 5984 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 SEC63P2-201ENST00000503863 1939 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 RNA5SP308-201ENST00000362532 115 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 RNU4-31P-201ENST00000384211 141 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 ATP5HP3-201ENST00000396994 486 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 CYCSP17-201ENST00000407870 315 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 RN7SKP263-201ENST00000411194 309 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC007435.1-201ENST00000421086 415 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 Z82198.3-201ENST00000421145 199 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 GTF2IP23-201ENST00000423746 351 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 MTCO1P3-201ENST00000429327 192 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 MTND1P2-201ENST00000430604 821 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AC013403.1-201ENST00000436954 263 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 RPEP4-201ENST00000437636 602 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CNTN3Q9P232 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.33□□□□□ -1.24
CNTN3Q9P232 PFN1P11-201ENST00000445829 389 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 RPL36AP33-201ENST00000450395 310 ntBASIC7.33□□□□□ -1.24
CNTN3Q9P232 SNRPGP9-201ENST00000456025 225 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms