Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NPM1P5-201ENST00000557228 838 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC010632.3-201ENST00000611377 369 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 PCA3_2.1-201ENST00000612507 409 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 MIR133A2-201ENST00000347538 102 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 RNU1-149P-201ENST00000390870 161 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AK3P5-201ENST00000432033 519 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AL672138.1-201ENST00000450604 1015 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 SBDSP1-204ENST00000453858 737 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC090638.1-201ENST00000498296 909 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 AC021193.1-201ENST00000511607 420 ntBASIC5.13□□□□□ -1.59
CCDC88CQ9P219 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC88CQ9P219 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 RPL23P2-201ENST00000320371 421 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 RNU1-43P-201ENST00000365052 165 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 RNA5SP339-201ENST00000390987 122 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AC079809.1-201ENST00000415468 276 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AP000797.2-201ENST00000475768 606 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AP002884.5-201ENST00000595053 1132 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AC009237.13-201ENST00000603193 276 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AC026367.3-201ENST00000619032 590 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AP001029.2-203ENST00000589795 4910 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AL034546.1-201ENST00000623740 3693 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 MAPK10-328ENST00000641553 4009 ntBASIC5.12□□□□□ -1.59
CCDC88CQ9P219 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC88CQ9P219 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 BX284613.1-201ENST00000452221 1641 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC027290.2-201ENST00000623210 18662 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 RN7SKP6-201ENST00000364795 319 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 DBIP1-201ENST00000401435 260 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 DNAJB5P1-201ENST00000454004 806 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 IGLV2-34-201ENST00000490007 283 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 NPM1P28-201ENST00000492269 840 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 SNRPCP2-201ENST00000504370 475 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC097486.1-201ENST00000515331 210 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 HMGN2P6-201ENST00000551091 273 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AP002512.4-202ENST00000641599 4530 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms