Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VTA1Q9NP79 HSPD1P11-201ENST00000508643 1702 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 RNU6-31P-201ENST00000384388 108 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 HMGB1P20-201ENST00000402555 677 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AL391361.1-201ENST00000405580 489 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 OR3A2-201ENST00000408891 1076 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 BMS1P17-202ENST00000416720 316 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC099677.3-201ENST00000427081 395 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 LDHAP2-201ENST00000437325 985 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 ARF4P4-201ENST00000439608 520 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC099521.1-201ENST00000482557 334 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 RPL23AP40-201ENST00000487630 390 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC108120.2-201ENST00000512973 294 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 TPM3P3-201ENST00000521343 354 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 OR4H6P-201ENST00000563771 921 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AL445435.1-201ENST00000604232 665 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC091193.1-201ENST00000604640 448 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC104695.2-201ENST00000605056 775 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AC140725.3-201ENST00000616193 880 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AP000484.1-201ENST00000620067 1252 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 AL691477.1-201ENST00000624398 162 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 AL022323.4-201ENST00000623980 13120 ntBASIC6.7□□□□□ -1.34
VTA1Q9NP79 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VTA1Q9NP79 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
VTA1Q9NP79 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTA1Q9NP79 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTA1Q9NP79 RNA5SP394-201ENST00000364216 119 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RNA5SP105-201ENST00000391123 113 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RPL22P22-201ENST00000395439 379 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 NACAP7-201ENST00000407371 609 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 OR2AT2P-201ENST00000413438 905 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RPS4XP5-201ENST00000419038 768 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 EIF4A1P1-201ENST00000420241 934 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 NME1P1-201ENST00000420914 382 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 BX510359.3-201ENST00000422168 306 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 AL034379.1-201ENST00000423216 253 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 TPTE2P3-201ENST00000441562 1189 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 LRRC37A14P-201ENST00000452297 462 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC069277.2-201ENST00000454211 432 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC128716.1-201ENST00000475129 166 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RPS17P15-201ENST00000475609 349 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RN7SL629P-201ENST00000489622 285 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 RN7SL466P-201ENST00000497546 295 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC106734.1-201ENST00000568646 663 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 MIR4505-201ENST00000582238 73 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 AL606834.3-201ENST00000602615 496 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 FO393422.1-201ENST00000603908 708 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC145423.1-201ENST00000605712 336 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC009974.1-201ENST00000608881 455 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 CYCSP41-201ENST00000616920 296 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 AC087565.3-203ENST00000641018 837 ntBASIC6.69□□□□□ -1.34
VTA1Q9NP79 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.69□□□□□ -1.34
VTA1Q9NP79 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VTA1Q9NP79 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VTA1Q9NP79 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms