Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 AC099786.3-201ENST00000565735 1410 ntBASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.73□□□□□ -1.49
AMBRA1Q9C0C7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC090220.1-201ENST00000593078 1699 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 MIR513B-201ENST00000385136 84 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 HMGB1P10-201ENST00000395823 563 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AL096711.1-201ENST00000404780 554 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC073410.1-201ENST00000435125 589 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 NAP1L1P3-201ENST00000462291 880 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC104339.1-201ENST00000465478 348 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RN7SL369P-201ENST00000477138 299 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RN7SL214P-201ENST00000487317 265 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 GOLGA5P1-201ENST00000507317 980 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC117522.2-201ENST00000510049 657 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RNA5SP418-201ENST00000515951 117 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC005363.1-201ENST00000530779 351 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC092865.1-201ENST00000544395 1023 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AL049779.3-201ENST00000557141 606 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 DYNLL1P1-201ENST00000595442 269 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC119501.1-201ENST00000603646 475 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC091304.6-201ENST00000619761 202 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AL137067.2-201ENST00000621202 131 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC089999.3-201ENST00000622440 577 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC025262.3-201ENST00000623666 360 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC068137.4-201ENST00000638485 296 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AC132825.1-201ENST00000463573 2247 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AMBRA1Q9C0C7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.71□□□□□ -1.49
AMBRA1Q9C0C7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.71□□□□□ -1.49
AMBRA1Q9C0C7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
AMBRA1Q9C0C7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 U3.10-201ENST00000364459 214 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC119751.3-201ENST00000399720 670 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 XKRYP4-201ENST00000414395 483 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 PTCD2P2-201ENST00000415579 1095 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 RPS24P7-201ENST00000416921 246 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AL360013.1-201ENST00000419031 858 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 NAP1L4P2-201ENST00000425958 899 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 PSMD10P2-201ENST00000432890 672 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 GAPDHP23-201ENST00000444823 993 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 OR6K5P-201ENST00000447050 945 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 XKRYP5-201ENST00000449659 483 ntBASIC5.71□□□□□ -1.5
AMBRA1Q9C0C7 AC008280.2-201ENST00000455473 307 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms