Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 AC008626.2-201ENST00000624425 248 ntBASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM55Q9BYV6 AC093225.1-201ENST00000506867 1408 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC004023.1-201ENST00000561473 1744 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 Z97989.1-201ENST00000531702 2421 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 RN7SKP55-201ENST00000364888 307 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SNORA70.9-201ENST00000384370 135 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 TRGV6-201ENST00000417928 299 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 BX119904.4-201ENST00000424402 301 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 UBE2D3P1-201ENST00000436669 444 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 GTF2IP7-202ENST00000436677 309 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 RPEP4-201ENST00000437636 602 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC010878.1-201ENST00000456500 1047 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AP000805.1-201ENST00000471604 784 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC128716.1-201ENST00000475129 166 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AL591122.1-201ENST00000487348 492 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC009567.2-201ENST00000502989 349 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC026782.2-201ENST00000510845 636 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AP001804.1-201ENST00000526868 919 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 HMGB1P42-201ENST00000532126 553 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC125612.1-201ENST00000547580 377 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 OR4C49P-201ENST00000563891 900 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC007255.2-201ENST00000604053 631 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AL021368.3-201ENST00000607119 578 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC055764.2-201ENST00000610089 670 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 MIR7973-1-201ENST00000614683 76 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC005899.7-201ENST00000618199 588 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC211486.4-201ENST00000621495 113 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 AC007671.2-201ENST00000637344 619 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 MTND4P31-201ENST00000425607 1343 ntBASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM55Q9BYV6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms