Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC092648.1-201ENST00000425870 423 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 RPL12P18-201ENST00000437175 325 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL117351.1-201ENST00000438864 766 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 SOCS5P1-201ENST00000440415 949 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC016908.1-201ENST00000442571 1219 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC092647.3-201ENST00000443044 633 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC044797.1-201ENST00000445744 679 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC007383.1-201ENST00000445875 636 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 MTND6P5-201ENST00000448266 512 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 TPT1P3-201ENST00000492841 512 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC122718.2-201ENST00000505325 591 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC104229.1-201ENST00000561364 255 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC021483.2-201ENST00000567415 758 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 OOSP1P2-201ENST00000579644 351 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 MIR4271-201ENST00000582451 67 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC027229.1-201ENST00000583887 253 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC245036.5-201ENST00000596330 847 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AC006363.1-201ENST00000603806 463 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 FAM72A-208ENST00000607379 1139 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.59□□□□□ -1.51
SNX18Q96RF0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX18Q96RF0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX18Q96RF0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SNX18Q96RF0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SNX18Q96RF0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 RNU1-65P-201ENST00000363919 148 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 YWHAZP4-201ENST00000392459 708 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 GAPDHP15-201ENST00000398586 975 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 MIR1275-201ENST00000408770 80 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 RN7SKP86-201ENST00000410454 332 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC115285.1-201ENST00000424879 736 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC245047.2-201ENST00000441060 530 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 GAPDHP14-201ENST00000450472 937 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AL122001.1-201ENST00000457027 370 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC092691.2-201ENST00000461787 803 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 RN7SL369P-201ENST00000477138 299 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 RPL21P47-201ENST00000483696 477 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 RN7SL170P-201ENST00000487098 295 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 MTND4LP2-201ENST00000502312 285 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC106822.1-201ENST00000502647 526 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC113367.2-201ENST00000505749 160 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 ST13P12-201ENST00000508958 1094 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 ASNSP4-201ENST00000511103 447 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 SETP21-201ENST00000514799 892 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 RNU6-311P-201ENST00000516224 102 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 HAUS1P3-201ENST00000523909 662 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 MTATP6P15-201ENST00000527233 835 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC010735.1-201ENST00000567305 1026 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC009852.2-201ENST00000567898 485 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC023824.3-201ENST00000569003 562 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC063977.7-201ENST00000594454 337 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AL365400.2-201ENST00000605604 902 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AP002802.2-201ENST00000605877 235 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms