Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC005363.1-201ENST00000530779 351 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 OR4A12P-201ENST00000530847 918 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 OR5F2P-201ENST00000532761 941 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC116553.2-201ENST00000564203 463 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 PPIAP14-201ENST00000577627 496 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 MIMT1-201ENST00000597105 1050 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 VN1R107P-201ENST00000601784 209 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL355598.1-201ENST00000604169 202 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC068276.1-201ENST00000605793 379 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AL683826.1-201ENST00000624104 627 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 MIR1910-201ENST00000636955 80 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 SAMMSON-227ENST00000642114 1199 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 AC092162.3-201ENST00000624511 1624 ntBASIC8.24□□□□□ -1.09
TRIM47Q96LD4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM47Q96LD4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC138915.4-201ENST00000565549 4147 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL355852.1-201ENST00000454081 1771 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 WNK1-220ENST00000574564 1401 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC137056.2-201ENST00000624055 1958 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 PPIAP22-201ENST00000358455 498 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RNU4-79P-201ENST00000362764 141 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RNA5SP382-201ENST00000363355 112 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RNU6-236P-201ENST00000363886 106 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RN7SKP15-201ENST00000364742 309 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RNU6-413P-201ENST00000384115 107 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RNU6-757P-201ENST00000410334 100 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 Z99497.1-201ENST00000421282 135 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL389925.1-201ENST00000432257 728 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 Z83313.1-201ENST00000433780 718 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC128677.1-201ENST00000436016 442 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 MTND2P29-201ENST00000438595 412 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RPS10P18-201ENST00000442662 495 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC245291.3-201ENST00000443400 292 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC018638.3-201ENST00000461273 132 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RPS3AP49-201ENST00000472161 790 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC017037.2-201ENST00000513850 890 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC104417.1-201ENST00000523974 751 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC013283.1-201ENST00000557282 492 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC104229.1-201ENST00000561364 255 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 NDUFA5P11-201ENST00000567995 343 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC027281.1-201ENST00000574178 758 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 RPL7AP69-201ENST00000595306 806 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC063977.5-201ENST00000601044 974 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC015871.2-201ENST00000603605 948 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC015849.2-201ENST00000605738 409 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 AC027807.2-201ENST00000616099 408 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM47Q96LD4 MIR8089-201ENST00000620165 82 ntBASIC8.23□□□□□ -1.09
TRIM47Q96LD4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms