Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 TCEA1P2-201ENST00000420496 906 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 CETN4P-201ENST00000432407 469 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 DEFA9P-201ENST00000433042 285 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 PNKDP1-201ENST00000435914 430 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MTND2P40-201ENST00000436718 841 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ELOCP13-201ENST00000443934 329 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 RPL5P7-201ENST00000444235 813 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MED28P3-201ENST00000444288 531 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MTATP6P26-201ENST00000445926 662 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 OR7E116P-201ENST00000448529 957 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC005077.1-201ENST00000449226 375 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 RPL23AP23-201ENST00000452590 471 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC069277.2-201ENST00000454211 432 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC008379.1-201ENST00000463655 464 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC098847.1-201ENST00000473094 348 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC020898.1-201ENST00000474167 787 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC135999.1-201ENST00000478962 479 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 RPS7P6-201ENST00000485777 579 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC069306.1-201ENST00000507006 843 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 EEF1A1P37-201ENST00000522748 715 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC068870.1-201ENST00000563737 2455 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ARGFXP2-201ENST00000579304 949 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MIR4776-2-201ENST00000580204 80 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 MTCO2P2-201ENST00000591258 225 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL031658.2-201ENST00000616850 651 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AC117409.1-201ENST00000470499 1310 ntBASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4AQ8WYN0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AF287957.1-201ENST00000607368 1595 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RAD1P1-201ENST00000231383 813 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP184-201ENST00000362348 333 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 MIR130A-201ENST00000385274 89 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC016739.1-201ENST00000405359 345 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 VN1R21P-201ENST00000426703 765 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 MTND1P33-201ENST00000446251 917 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RPL7P55-201ENST00000450522 746 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 PRELID3BP5-201ENST00000508612 460 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC018797.1-201ENST00000510791 255 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 RNA5SP340-201ENST00000517132 107 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC139365.2-201ENST00000517972 253 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC118942.1-201ENST00000529674 1035 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 NPM1P35-201ENST00000533043 868 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC137627.1-201ENST00000545761 289 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 MIR4502-201ENST00000580432 81 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC005244.1-201ENST00000582566 339 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms