Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ATP5LP5-201ENST00000483050 299 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 GLRXP2-201ENST00000555594 321 ntBASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC3.56□□□□□ -1.84
ALMS1Q8TCU4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL049697.2-201ENST00000403708 294 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CHEK2P3-201ENST00000416118 248 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RPL7AP10-201ENST00000481016 791 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SCARNA22-201ENST00000503991 125 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC068831.4-201ENST00000556118 109 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC023575.1-201ENST00000580510 358 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC022164.1-201ENST00000568767 2673 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 IQCB2P-201ENST00000401788 1633 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC007998.4-201ENST00000612496 2533 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RNU4-39P-201ENST00000362455 127 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 USP24P1-201ENST00000433802 779 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL590399.4-201ENST00000436561 601 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RN7SKP92-201ENST00000517266 244 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AP001357.1-201ENST00000586304 1053 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC093671.1-201ENST00000624981 2929 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SNORA37-201ENST00000384504 129 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC116036.1-201ENST00000412199 367 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC009963.4-201ENST00000448535 339 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL445687.2-201ENST00000458156 728 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AL022323.4-201ENST00000623980 13120 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AP000473.2-201ENST00000602659 1537 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC007562.1-201ENST00000421819 517 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 AC023274.2-201ENST00000445264 521 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 RPL12P20-201ENST00000475538 479 ntBASIC3.55□□□□□ -1.84
ALMS1Q8TCU4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms