Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Z80107.1-201ENST00000436830 412 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 GSTA7P-201ENST00000438425 448 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 TPTE2P3-201ENST00000441562 1189 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 RPL12P39-201ENST00000455456 496 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC008628.1-201ENST00000508663 265 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 HMGN1P15-201ENST00000513870 295 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 RN7SKP253-201ENST00000516424 309 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 RNU4-18P-201ENST00000516751 149 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC103968.1-201ENST00000557841 573 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC097065.2-201ENST00000608159 533 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC008833.1-201ENST00000611633 691 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 AC068057.2-201ENST00000624047 895 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE4Q8N205 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.94□□□□□ -1.3
SYNE4Q8N205 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE4Q8N205 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AL353796.1-201ENST00000561542 3241 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 OR51C1P-202ENST00000641159 1444 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC097634.1-201ENST00000604491 2467 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 RNU1-106P-201ENST00000384382 164 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 RNA5SP339-201ENST00000390987 122 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 RPSAP35-201ENST00000413753 818 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AL357078.2-201ENST00000416486 427 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 RPS26P13-201ENST00000419030 330 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 CRIP1P1-201ENST00000427567 185 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AL596266.1-201ENST00000448132 400 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 RNU6-941P-201ENST00000516346 108 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC021733.2-201ENST00000518830 497 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC138701.1-201ENST00000524329 714 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 GSTP1P1-201ENST00000548078 319 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC006115.2-201ENST00000596823 202 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AL513327.3-201ENST00000602618 469 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 BNIP3P31-201ENST00000604515 566 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 AC109583.2-201ENST00000617367 129 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 AL450226.2-201ENST00000622913 439 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 MTCO1P1-201ENST00000624263 1081 ntBASIC6.93□□□□□ -1.3
SYNE4Q8N205 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE4Q8N205 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE4Q8N205 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC112255.1-201ENST00000624070 2493 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AL009179.1-201ENST00000406085 265 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC092106.1-201ENST00000444291 373 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 MTATP6P26-201ENST00000445926 662 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AL139824.2-201ENST00000458731 1095 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms