Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Z69908.1-201ENST00000622603 247 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC091965.5-201ENST00000624785 342 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 LINC01613-201ENST00000561476 2780 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AL355377.1-201ENST00000621125 1653 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 AC022034.1-201ENST00000512867 2156 ntBASIC6.33□□□□□ -1.4
TRIM48Q8IWZ4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC096656.1-201ENST00000623826 1364 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL359976.1-201ENST00000418655 3528 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RPL11P4-201ENST00000332269 436 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RN7SKP171-201ENST00000364417 303 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RNA5SP512-201ENST00000364550 120 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC003045.1-201ENST00000398779 713 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL391419.1-201ENST00000398901 1275 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 GSTA8P-201ENST00000404253 637 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL356968.2-201ENST00000412769 1257 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CDY17P-201ENST00000414121 1282 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC083862.1-201ENST00000427378 1242 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CDY8P-201ENST00000428380 1279 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 ETF1P3-201ENST00000430422 1160 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL360221.1-201ENST00000445989 335 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CDY20P-201ENST00000447528 1279 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 OR52J1P-201ENST00000450596 932 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL139156.3-201ENST00000454802 394 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RN7SL168P-201ENST00000463821 279 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 H3F3AP5-201ENST00000475267 429 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC063943.2-201ENST00000495697 534 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC018645.1-201ENST00000505003 109 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC122718.2-201ENST00000505325 591 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC091860.1-201ENST00000505723 432 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RNA5SP418-201ENST00000515951 117 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RNU6-232P-201ENST00000517144 64 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 OR52K3P-201ENST00000531655 943 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 ELOCP32-201ENST00000548625 324 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MIR5095-201ENST00000578844 88 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC087752.4-201ENST00000605911 462 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AL359091.2-201ENST00000609303 556 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MIR7109-201ENST00000613748 65 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 LINC02495-203ENST00000636704 242 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM48Q8IWZ4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 AC017007.4-201ENST00000503353 1352 ntBASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM48Q8IWZ4 AL391261.1-201ENST00000555712 1479 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms