Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC068870.1-201ENST00000563737 2455 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC007342.9-201ENST00000623877 1385 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC005042.1-201ENST00000393397 800 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 UBE2V2P3-201ENST00000433562 437 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 Z84478.1-201ENST00000438230 1219 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 RPS23P6-201ENST00000466136 431 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 MORF4L2P1-201ENST00000503761 858 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 RNU4-18P-201ENST00000516751 149 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 RNA5SP230-201ENST00000517039 122 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AL359219.2-201ENST00000555184 348 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 MIR1273E-201ENST00000581165 102 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 OR7E18P-201ENST00000592589 702 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC009237.13-201ENST00000603193 276 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC138965.3-201ENST00000623875 498 ntBASIC5.22□□□□□ -1.57
CCDC71Q8IV32 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC71Q8IV32 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC71Q8IV32 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC71Q8IV32 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CCDC71Q8IV32 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 U3.28-201ENST00000391249 210 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AL445213.1-201ENST00000412589 747 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 CASKP1-201ENST00000412870 582 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 YY1P1-201ENST00000427625 668 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 TAAR4P-201ENST00000454843 1039 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC026348.1-201ENST00000462549 1053 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 SIAH1P1-201ENST00000479411 923 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AL133372.1-201ENST00000493565 745 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 DUTP1-201ENST00000493631 470 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AP001960.1-201ENST00000506494 658 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC138832.1-201ENST00000522871 556 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC145423.1-201ENST00000605712 336 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AL139124.1-201ENST00000609123 421 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AL139099.4-201ENST00000614802 114 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AL591135.1-201ENST00000401578 5914 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC027279.1-201ENST00000568885 4284 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 OR9K1P-202ENST00000641111 3217 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 AC144833.1-201ENST00000567953 4089 ntBASIC5.21□□□□□ -1.58
CCDC71Q8IV32 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CCDC71Q8IV32 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC71Q8IV32 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms