Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC232271.1-201ENST00000602455 2715 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 CASC19-260ENST00000641828 2001 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MFSD8-213ENST00000641134 1327 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RN7SKP128-201ENST00000364270 303 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-1320P-201ENST00000390838 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-1269P-201ENST00000391139 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 VIM2P-201ENST00000402383 1294 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RPL5P19-201ENST00000404228 893 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RN7SKP121-201ENST00000410842 305 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 OSTCP5-201ENST00000425293 453 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC092648.1-201ENST00000425870 423 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 OR6R1P-201ENST00000431838 940 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC128677.1-201ENST00000436016 442 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 OR10R1P-201ENST00000441524 1141 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 CUBNP2-201ENST00000443534 1139 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL034369.1-201ENST00000453808 477 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-599P-201ENST00000459383 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-1193P-201ENST00000459461 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AP003385.3-201ENST00000472498 287 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MTCO3P35-201ENST00000485582 781 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RPL23AP40-201ENST00000487630 390 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC015524.1-201ENST00000491585 472 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MTND4LP2-201ENST00000502312 285 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MIR4732-201ENST00000581873 76 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC026898.1-201ENST00000586404 571 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC245036.5-201ENST00000596330 847 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC008751.2-201ENST00000597885 980 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 NDUFB9P1-201ENST00000604683 510 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL591167.1-201ENST00000607321 456 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MIR6883-201ENST00000614952 78 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-368P-201ENST00000620928 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-538P-201ENST00000622329 107 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AP002791.1-201ENST00000623291 381 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC004076.2-201ENST00000620532 3323 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AL355488.2-201ENST00000609909 2850 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 AC123769.1-201ENST00000530992 3192 ntBASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTCHD4Q6ZW05 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 HSPD1P11-201ENST00000508643 1702 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms