Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 MT-RNR2-201ENST00000387347 1559 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 RNU4-39P-201ENST00000362455 127 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 MIR1182-201ENST00000408363 97 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL365220.1-201ENST00000432923 399 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 MEMO1P4-201ENST00000453590 386 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC020890.1-201ENST00000491837 504 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC090058.1-201ENST00000498788 435 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 PPM1AP1-201ENST00000502740 1135 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 SAP18P1-201ENST00000512058 390 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC009643.1-201ENST00000532030 391 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC021483.2-201ENST00000567415 758 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL513327.3-201ENST00000602618 469 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC006338.2-201ENST00000616864 791 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRK2Q5S007 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 RN7SKP151-201ENST00000410230 316 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AL158073.1-201ENST00000426848 1104 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC023141.6-201ENST00000429418 337 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 RPL12P28-201ENST00000430852 489 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 TMEM183AP1-205ENST00000432739 290 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC091167.1-201ENST00000492017 396 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRK2Q5S007 AC008785.1-201ENST00000624475 456 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 KARSP3-201ENST00000571212 1504 ntBASIC4.67□□□□□ -1.66
LRRK2Q5S007 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC005005.4-201ENST00000623789 16698 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 HSPA8P15-201ENST00000401676 786 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 SCARNA9-201ENST00000530422 353 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC005224.3-201ENST00000584683 2140 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 BX322650.1-201ENST00000332359 2143 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC006065.1-201ENST00000422539 802 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRK2Q5S007 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 TRBV5-2-201ENST00000489095 273 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 AL121594.2-201ENST00000541658 472 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 MIR4691-201ENST00000583764 85 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 MIR4715-201ENST00000584117 79 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 AC006115.2-201ENST00000596823 202 ntBASIC4.66□□□□□ -1.66
LRRK2Q5S007 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms