Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MTND1P33-201ENST00000446251 917 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 EIF2S2P2-201ENST00000447161 982 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 MTND2P8-201ENST00000450555 1025 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL158068.1-201ENST00000506116 616 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP340-201ENST00000517132 107 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC060775.1-201ENST00000518241 520 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC079064.1-201ENST00000528365 362 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC027243.2-201ENST00000602530 724 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC021106.3-201ENST00000623925 531 ntBASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC144BQ3MJ40 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 MIR320B1-201ENST00000390209 79 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL031985.1-201ENST00000392713 418 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL512422.1-201ENST00000407033 553 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RN7SKP144-201ENST00000411108 279 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RPS26P38-201ENST00000414476 348 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 NANOGP5-201ENST00000424456 877 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 MTND2P2-201ENST00000434633 945 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC103563.5-201ENST00000455643 364 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RN7SL326P-201ENST00000477493 296 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RN7SL101P-201ENST00000496350 279 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RPL21P131-201ENST00000497298 483 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC111193.1-201ENST00000504097 155 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC114322.1-201ENST00000506771 926 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 MTATP6P1-201ENST00000514057 681 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP303-201ENST00000516192 130 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 RN7SKP238-201ENST00000516483 249 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 SNORA81.2-201ENST00000516868 170 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 IGHV1-14-201ENST00000523391 241 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC027104.1-201ENST00000563702 681 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 OR4H6P-201ENST00000563771 921 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 MTATP6P24-201ENST00000576835 677 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC233702.7-202ENST00000582941 211 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC100767.2-201ENST00000604840 693 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC096586.1-201ENST00000610267 561 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL352984.2-201ENST00000611153 546 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC009120.7-201ENST00000623452 780 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AC129778.1-202ENST00000623812 261 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AL591379.1-207ENST00000635982 261 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC144BQ3MJ40 VN2R3P-201ENST00000422626 1412 ntBASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
CCDC144BQ3MJ40 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms