Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AL157385.1-201ENST00000446973 268 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC091544.1-201ENST00000484702 348 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC011853.1-201ENST00000518911 454 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 BNIP3P1-201ENST00000547295 580 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 AC244107.2-201ENST00000611773 76 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 MIR6839-201ENST00000620425 113 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.03□□□□□ -1.6
RFX4Q33E94 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.03□□□□□ -1.6
RFX4Q33E94 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RFX4Q33E94 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFX4Q33E94 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.03□□□□□ -1.6
RFX4Q33E94 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.03□□□□□ -1.6
RFX4Q33E94 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFX4Q33E94 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.03□□□□□ -1.6
RFX4Q33E94 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 AL731532.2-201ENST00000623542 1953 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.02□□□□□ -1.61
RFX4Q33E94 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 RNA5SP477-201ENST00000362639 119 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AL050305.1-201ENST00000399993 1230 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 MIR1203-201ENST00000408812 85 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AL035660.1-201ENST00000422041 222 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AKR1B10P1-201ENST00000425765 942 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC069154.1-201ENST00000432914 542 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC046176.1-201ENST00000435260 1170 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.02□□□□□ -1.61
RFX4Q33E94 CTSLP6-201ENST00000458273 1002 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 RN7SL583P-201ENST00000475692 287 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC022215.1-201ENST00000481770 362 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 RPS3AP15-201ENST00000483874 781 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 OR5H7P-201ENST00000514084 930 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC022884.2-201ENST00000578535 580 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RFX4Q33E94 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX4Q33E94 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AC009779.8-202ENST00000607990 932 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 MIR6780B-201ENST00000610307 79 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 AL596275.2-207ENST00000641188 675 ntBASIC5.02□□□□□ -1.61
RFX4Q33E94 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RFX4Q33E94 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX4Q33E94 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RFX4Q33E94 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFX4Q33E94 SMC4P1-201ENST00000414479 527 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms