Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR3691-201ENST00000578066 90 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 MTCO1P1-201ENST00000624263 1081 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 AP003400.3-201ENST00000624904 346 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 CYP4F35P-202ENST00000636121 390 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 LINC01739-205ENST00000641890 573 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFX7Q2KHR2 AC092451.3-201ENST00000625067 1343 ntBASIC6.5□□□□□ -1.37
RFX7Q2KHR2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AL078621.3-201ENST00000623707 2042 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 SNORA67-201ENST00000384423 137 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 RNU1-149P-201ENST00000390870 161 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 RN7SKP216-201ENST00000411050 312 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AL451063.1-201ENST00000450164 1133 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC004453.1-201ENST00000487895 408 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC110775.1-201ENST00000513721 462 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 RN7SKP99-201ENST00000517028 307 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC130364.2-201ENST00000528639 604 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AP004607.2-201ENST00000533949 322 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 DNM1P47-203ENST00000571780 12667 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 CASC19-260ENST00000641828 2001 ntBASIC6.49□□□□□ -1.37
RFX7Q2KHR2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX7Q2KHR2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AL136231.1-201ENST00000429407 730 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 RPL12P3-201ENST00000440080 396 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 RN7SL423P-201ENST00000486202 304 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 RPS12P31-201ENST00000491419 398 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 IGBP1P4-201ENST00000503202 879 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 HMGN1P9-201ENST00000515212 298 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC060766.1-201ENST00000590824 627 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC003973.3-201ENST00000624863 2822 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC011493.1-201ENST00000596753 1632 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 AC079298.1-201ENST00000625026 1619 ntBASIC6.48□□□□□ -1.37
RFX7Q2KHR2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX7Q2KHR2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 OR9G4-201ENST00000302957 984 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RNA5SP443-201ENST00000363083 132 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RN7SL814P-201ENST00000487715 300 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RPS23P1-201ENST00000491662 432 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RNA5SP373-201ENST00000517271 95 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 YWHABP2-201ENST00000540201 713 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 NPM1P5-201ENST00000557228 838 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms