Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC093815.1-201ENST00000508637 280 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 TRAV11-201ENST00000539512 339 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 OR11J2P-201ENST00000555298 907 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC005252.1-201ENST00000604518 1063 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AL139041.1-201ENST00000605480 610 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC244107.2-201ENST00000611773 76 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AP003400.3-201ENST00000624904 346 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.46□□□□□ -1.38
PDS5AQ29RF7 CFTRP2-201ENST00000634304 199 ntBASIC6.46□□□□□ -1.38
PDS5AQ29RF7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AL137141.1-201ENST00000624622 4836 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC015799.1-201ENST00000622996 3122 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 RNA5SP305-201ENST00000362665 119 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 U3.3-201ENST00000362986 216 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AL354868.1-201ENST00000417077 482 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 RPL7AP6-201ENST00000477943 801 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 CR383656.1-201ENST00000484916 377 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 RNU6-751P-201ENST00000516382 101 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 OR8Q1P-201ENST00000526467 655 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC134349.2-201ENST00000535136 910 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC009120.7-201ENST00000623452 780 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 MTCO1P1-201ENST00000624263 1081 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.45□□□□□ -1.38
PDS5AQ29RF7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.45□□□□□ -1.38
PDS5AQ29RF7 AC020656.2-201ENST00000613291 5309 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC004076.2-201ENST00000620532 3323 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 RN7SKP185-201ENST00000362813 326 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 SNORA74A-201ENST00000364089 198 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 NDUFB4P8-201ENST00000435351 367 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 RPL7P40-201ENST00000481703 745 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC093270.2-201ENST00000486157 792 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC004453.1-201ENST00000487895 408 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC109462.1-201ENST00000491087 368 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 RPS24P16-201ENST00000497294 392 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 SEPT10P1-201ENST00000517342 1162 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AL445222.1-201ENST00000607259 628 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC118658.2-201ENST00000618697 459 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AC114774.1-201ENST00000507410 1770 ntBASIC6.44□□□□□ -1.38
PDS5AQ29RF7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.43□□□□□ -1.38
PDS5AQ29RF7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.43□□□□□ -1.38
PDS5AQ29RF7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDS5AQ29RF7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms