Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.24□□□□□ -1.41
CCNA1P78396 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.24□□□□□ -1.41
CCNA1P78396 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 AC144833.1-201ENST00000567953 4089 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCNA1P78396 TET1P1-201ENST00000426627 2301 ntBASIC6.24□□□□□ -1.41
CCNA1P78396 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCNA1P78396 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCNA1P78396 RNU1-136P-201ENST00000384181 164 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 CHMP1B2P-201ENST00000399581 597 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 AC211486.3-201ENST00000412694 621 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 FABP7P2-201ENST00000429946 379 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 DNAJB5P1-201ENST00000454004 806 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CCNA1P78396 RNU7-157P-201ENST00000459600 66 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCNA1P78396 BX284632.1-201ENST00000478218 541 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.23□□□□□ -1.41
CCNA1P78396 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.23□□□□□ -1.41
CCNA1P78396 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.23□□□□□ -1.41
CCNA1P78396 RN7SKP253-201ENST00000516424 309 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.23□□□□□ -1.41
CCNA1P78396 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.23□□□□□ -1.41
CCNA1P78396 NMNAT1P5-201ENST00000559657 841 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.23□□□□□ -1.41
CCNA1P78396 AP005403.1-201ENST00000579720 229 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 AC011840.5-201ENST00000582125 771 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 AC011447.4-201ENST00000587562 111 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CCNA1P78396 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCNA1P78396 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCNA1P78396 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.23□□□□□ -1.41
CCNA1P78396 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CCNA1P78396 AC020633.1-201ENST00000468439 2247 ntBASIC6.23□□□□□ -1.41
CCNA1P78396 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCNA1P78396 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCNA1P78396 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CCNA1P78396 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCNA1P78396 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.22□□□□□ -1.41
CCNA1P78396 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 DDX18P6-201ENST00000450119 1997 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CCNA1P78396 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCNA1P78396 MTHFD2P5-201ENST00000320415 844 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 AL121886.1-201ENST00000358609 435 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 RNU4-4P-201ENST00000364588 130 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 RN7SKP126-201ENST00000411143 300 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC096921.1-201ENST00000411661 375 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.22□□□□□ -1.41
CCNA1P78396 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 RPS26P13-201ENST00000419030 330 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.22□□□□□ -1.41
CCNA1P78396 AC073648.4-201ENST00000442655 781 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.22□□□□□ -1.41
CCNA1P78396 RPL7P40-201ENST00000481703 745 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 SNORA26.10-201ENST00000516427 141 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC024940.3-201ENST00000538551 316 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC137627.1-201ENST00000545761 289 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.22□□□□□ -1.41
CCNA1P78396 PCNPP1-201ENST00000552501 511 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 HNRNPCP1-201ENST00000556181 766 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCNA1P78396 AL445528.2-201ENST00000620582 470 ntBASIC6.22□□□□□ -1.41
CCNA1P78396 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.22□□□□□ -1.41
CCNA1P78396 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCNA1P78396 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCNA1P78396 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCNA1P78396 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CCNA1P78396 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.21□□□□□ -1.41
CCNA1P78396 AL360270.2-201ENST00000562952 5985 ntBASIC6.21□□□□□ -1.41
CCNA1P78396 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNA1P78396 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
CCNA1P78396 PROS2P-201ENST00000474651 1951 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCNA1P78396 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNA1P78396 RPA2P2-201ENST00000419698 796 ntBASIC6.21□□□□□ -1.42
CCNA1P78396 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms