Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.14□□□□□ -1.43
GFRA1P56159 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC079089.3-201ENST00000603094 673 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC006328.2-201ENST00000623198 397 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC034229.6-201ENST00000623704 224 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 AC012005.2-201ENST00000624333 397 ntBASIC6.14□□□□□ -1.43
GFRA1P56159 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.14□□□□□ -1.43
GFRA1P56159 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
GFRA1P56159 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GFRA1P56159 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GFRA1P56159 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 RNU1-5P-201ENST00000362684 144 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 SNORA70.3-201ENST00000365075 132 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 RNU6-1215P-201ENST00000384441 102 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 MIR551B-201ENST00000384984 96 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 RPL7P8-201ENST00000411964 730 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 CDC42P6-201ENST00000421246 576 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 MTCYBP5-201ENST00000423752 1135 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AL022331.1-201ENST00000429025 477 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 GAPDHP20-201ENST00000444107 1007 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 CDC27P1-201ENST00000445384 715 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC021074.2-201ENST00000468434 172 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC072039.1-201ENST00000477611 581 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 RN7SL70P-201ENST00000478322 302 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 ACTG1P13-201ENST00000486987 1043 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC074386.1-206ENST00000487102 761 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 RN7SL612P-201ENST00000497704 295 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GFRA1P56159 SUMO2P4-201ENST00000504193 276 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 MRPL57P6-201ENST00000506570 309 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 MRPS5P3-201ENST00000515577 166 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.13□□□□□ -1.43
GFRA1P56159 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GFRA1P56159 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.13□□□□□ -1.43
GFRA1P56159 AL591767.3-201ENST00000554632 525 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GFRA1P56159 ROCK1P1-201ENST00000573767 549 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.13□□□□□ -1.43
GFRA1P56159 SNORA70D-201ENST00000578836 135 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 CTSLP2-201ENST00000580501 394 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 MIR4801-201ENST00000582704 82 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 RPL7AP69-201ENST00000595306 806 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AL136363.2-201ENST00000604173 851 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 AC061999.1-201ENST00000624454 177 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.13□□□□□ -1.43
GFRA1P56159 AC020658.2-201ENST00000559030 4020 ntBASIC6.13□□□□□ -1.43
GFRA1P56159 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms