Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 AC079097.1-201ENST00000512187 1399 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 AC092681.1-201ENST00000297369 291 ntBASIC5.45□□□□□ -1.54
CDH13P55290 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH13P55290 RNU4-39P-201ENST00000362455 127 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC004386.1-201ENST00000393214 761 ntBASIC5.45□□□□□ -1.54
CDH13P55290 OR1F12-201ENST00000402365 945 ntBASIC5.45□□□□□ -1.54
CDH13P55290 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 AC009784.1-201ENST00000426484 460 ntBASIC5.45□□□□□ -1.54
CDH13P55290 CLNS1AP1-201ENST00000435954 682 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH13P55290 AL161722.1-201ENST00000446972 1032 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH13P55290 MTND5P8-201ENST00000449817 1083 ntBASIC5.45□□□□□ -1.54
CDH13P55290 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 AC138832.1-201ENST00000522871 556 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC079064.1-201ENST00000528365 362 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH13P55290 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH13P55290 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH13P55290 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH13P55290 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 MIR4311-201ENST00000580794 100 ntBASIC5.45□□□□□ -1.54
CDH13P55290 MIMT1-201ENST00000597105 1050 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AL139124.1-201ENST00000609123 421 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC074276.2-201ENST00000619891 348 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AL591926.1-201ENST00000620542 217 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC024884.1-201ENST00000620583 399 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC073592.7-201ENST00000623659 507 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC073592.6-201ENST00000624271 415 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC021766.1-201ENST00000624404 741 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH13P55290 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.45□□□□□ -1.54
CDH13P55290 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.45□□□□□ -1.54
CDH13P55290 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CDH13P55290 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 SNORA64.1-201ENST00000362600 132 ntBASIC5.44□□□□□ -1.54
CDH13P55290 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDH13P55290 AL009179.1-201ENST00000406085 265 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC234781.4-201ENST00000419384 244 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AK4P4-201ENST00000419465 646 ntBASIC5.44□□□□□ -1.54
CDH13P55290 MGAT2P2-201ENST00000427194 797 ntBASIC5.44□□□□□ -1.54
CDH13P55290 MTATP6P11-201ENST00000428071 670 ntBASIC5.44□□□□□ -1.54
CDH13P55290 RPL7P56-201ENST00000429441 717 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC069154.1-201ENST00000432914 542 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC073465.2-201ENST00000440938 498 ntBASIC5.44□□□□□ -1.54
CDH13P55290 VN1R48P-201ENST00000448149 1036 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC005165.2-201ENST00000466070 380 ntBASIC5.44□□□□□ -1.54
CDH13P55290 OR11I1P-201ENST00000486033 954 ntBASIC5.44□□□□□ -1.54
CDH13P55290 PSMA2P2-201ENST00000504319 686 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC122718.2-201ENST00000505325 591 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH13P55290 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH13P55290 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.44□□□□□ -1.54
CDH13P55290 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDH13P55290 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH13P55290 AC005726.4-201ENST00000582858 458 ntBASIC5.44□□□□□ -1.54
CDH13P55290 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH13P55290 AC010632.3-201ENST00000611377 369 ntBASIC5.44□□□□□ -1.54
CDH13P55290 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH13P55290 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 OR8G3P-202ENST00000641572 1255 ntBASIC5.44□□□□□ -1.54
CDH13P55290 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CDH13P55290 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH13P55290 AC107021.2-201ENST00000567714 2095 ntBASIC5.44□□□□□ -1.54
CDH13P55290 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CDH13P55290 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms