Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.02□□□□□ -1.45
VCPP55072 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.02□□□□□ -1.45
VCPP55072 AC009506.2-201ENST00000420635 840 ntBASIC6.02□□□□□ -1.45
VCPP55072 RPL5P2-201ENST00000429598 854 ntBASIC6.02□□□□□ -1.45
VCPP55072 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 RNU1-88P-201ENST00000459274 128 ntBASIC6.02□□□□□ -1.45
VCPP55072 RNU7-157P-201ENST00000459600 66 ntBASIC6.02□□□□□ -1.45
VCPP55072 AC099521.1-201ENST00000482557 334 ntBASIC6.02□□□□□ -1.45
VCPP55072 OR8Q1P-201ENST00000526467 655 ntBASIC6.02□□□□□ -1.45
VCPP55072 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 AC096996.1-201ENST00000563813 325 ntBASIC6.02□□□□□ -1.45
VCPP55072 MIR4646-201ENST00000580775 63 ntBASIC6.02□□□□□ -1.45
VCPP55072 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.02□□□□□ -1.45
VCPP55072 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.02□□□□□ -1.45
VCPP55072 AC073869.7-201ENST00000640874 297 ntBASIC6.02□□□□□ -1.45
VCPP55072 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
VCPP55072 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VCPP55072 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 SAMM50P1-201ENST00000455403 1399 ntBASIC6.02□□□□□ -1.45
VCPP55072 AC005261.6-201ENST00000623072 1387 ntBASIC6.02□□□□□ -1.45
VCPP55072 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.02□□□□□ -1.45
VCPP55072 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VCPP55072 SRRM1P3-201ENST00000426911 2678 ntBASIC6.02□□□□□ -1.45
VCPP55072 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 AC026951.1-201ENST00000559530 2459 ntBASIC6.01□□□□□ -1.45
VCPP55072 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.01□□□□□ -1.45
VCPP55072 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 RPL23P2-201ENST00000320371 421 ntBASIC6.01□□□□□ -1.45
VCPP55072 RNA5SP234-201ENST00000363916 119 ntBASIC6.01□□□□□ -1.45
VCPP55072 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 SLC35E1P1-201ENST00000419313 864 ntBASIC6.01□□□□□ -1.45
VCPP55072 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.01□□□□□ -1.45
VCPP55072 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 CEACAMP7-201ENST00000444105 496 ntBASIC6.01□□□□□ -1.45
VCPP55072 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 RPL32P33-201ENST00000487023 394 ntBASIC6.01□□□□□ -1.45
VCPP55072 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 AC105384.2-201ENST00000508433 640 ntBASIC6.01□□□□□ -1.45
VCPP55072 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AP004607.2-201ENST00000533949 322 ntBASIC6.01□□□□□ -1.45
VCPP55072 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AC007066.2-202ENST00000566531 914 ntBASIC6.01□□□□□ -1.45
VCPP55072 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
VCPP55072 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.01□□□□□ -1.45
VCPP55072 HIRAP1-201ENST00000605318 787 ntBASIC6.01□□□□□ -1.45
VCPP55072 AC010245.2-201ENST00000606908 1167 ntBASIC6.01□□□□□ -1.45
VCPP55072 AC015712.7-201ENST00000615211 635 ntBASIC6.01□□□□□ -1.45
VCPP55072 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 AP004607.3-201ENST00000530354 3915 ntBASIC6.01□□□□□ -1.45
VCPP55072 AL137141.1-201ENST00000624622 4836 ntBASIC6.01□□□□□ -1.45
VCPP55072 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VCPP55072 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VCPP55072 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VCPP55072 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VCPP55072 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VCPP55072 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.01□□□□□ -1.45
VCPP55072 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.01□□□□□ -1.45
VCPP55072 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 AC114786.1-201ENST00000512892 1415 ntBASIC6□□□□□ -1.45
VCPP55072 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6□□□□□ -1.45
VCPP55072 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
VCPP55072 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6□□□□□ -1.45
VCPP55072 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 AC007842.1-201ENST00000597336 2039 ntBASIC6□□□□□ -1.45
VCPP55072 RNA5SP453-201ENST00000362503 119 ntBASIC6□□□□□ -1.45
VCPP55072 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6□□□□□ -1.45
VCPP55072 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 U3.23-201ENST00000391132 200 ntBASIC6□□□□□ -1.45
VCPP55072 CBX1P3-201ENST00000413296 527 ntBASIC6□□□□□ -1.45
VCPP55072 RPS26P13-201ENST00000419030 330 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms