Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RNA5SP116-201ENST00000516132 98 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 AC012400.1-201ENST00000518452 381 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 AC084824.2-201ENST00000548906 345 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.44□□□□□ -1.22
CLTCL1P53675 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CLTCL1P53675 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CLTCL1P53675 AC209154.1-201ENST00000582156 337 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 AC105254.2-201ENST00000603636 436 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.44□□□□□ -1.22
CLTCL1P53675 MIR6133-201ENST00000617057 108 ntBASIC7.44□□□□□ -1.22
CLTCL1P53675 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.44□□□□□ -1.22
CLTCL1P53675 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLTCL1P53675 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLTCL1P53675 AL359955.1-201ENST00000455242 3275 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.43□□□□□ -1.22
CLTCL1P53675 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CLTCL1P53675 RPL10P10-201ENST00000403509 664 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.43□□□□□ -1.22
CLTCL1P53675 NDUFB4P8-201ENST00000435351 367 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 OR7E125P-201ENST00000443450 846 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.43□□□□□ -1.22
CLTCL1P53675 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 MRPS33P2-201ENST00000507850 322 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 OR51K1P-201ENST00000510214 950 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.43□□□□□ -1.22
CLTCL1P53675 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.43□□□□□ -1.22
CLTCL1P53675 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 UBE2FP2-201ENST00000566646 462 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 AC008745.1-201ENST00000604064 271 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 AL022394.1-201ENST00000606979 292 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 AC119674.1-217ENST00000641942 1086 ntBASIC7.43□□□□□ -1.22
CLTCL1P53675 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CLTCL1P53675 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLTCL1P53675 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.43□□□□□ -1.22
CLTCL1P53675 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 RN7SKP114-201ENST00000410327 279 ntBASIC7.42□□□□□ -1.22
CLTCL1P53675 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.42□□□□□ -1.22
CLTCL1P53675 RN7SL738P-201ENST00000470264 297 ntBASIC7.42□□□□□ -1.22
CLTCL1P53675 AC090142.2-201ENST00000483263 416 ntBASIC7.42□□□□□ -1.22
CLTCL1P53675 AC005412.2-201ENST00000492004 341 ntBASIC7.42□□□□□ -1.22
CLTCL1P53675 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.42□□□□□ -1.22
CLTCL1P53675 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.42□□□□□ -1.22
CLTCL1P53675 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.42□□□□□ -1.22
CLTCL1P53675 BNIP3P35-201ENST00000604530 490 ntBASIC7.42□□□□□ -1.22
CLTCL1P53675 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CLTCL1P53675 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.42□□□□□ -1.22
CLTCL1P53675 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CLTCL1P53675 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLTCL1P53675 RN7SKP113-201ENST00000363891 295 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 MIR589-201ENST00000385238 99 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 GAPDHP15-201ENST00000398586 975 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.41□□□□□ -1.22
CLTCL1P53675 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.41□□□□□ -1.22
CLTCL1P53675 AC112498.1-201ENST00000444401 332 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 RPL7P40-201ENST00000481703 745 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 AC010350.1-201ENST00000504908 231 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.41□□□□□ -1.22
CLTCL1P53675 RNA5SP392-201ENST00000516905 112 ntBASIC7.41□□□□□ -1.22
CLTCL1P53675 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.41□□□□□ -1.22
CLTCL1P53675 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.41□□□□□ -1.22
CLTCL1P53675 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.41□□□□□ -1.22
CLTCL1P53675 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.41□□□□□ -1.22
CLTCL1P53675 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms