Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.14□□□□□ -1.43
COPAP53621 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.14□□□□□ -1.43
COPAP53621 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.14□□□□□ -1.43
COPAP53621 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.14□□□□□ -1.43
COPAP53621 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.14□□□□□ -1.43
COPAP53621 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.14□□□□□ -1.43
COPAP53621 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 AC141002.1-201ENST00000607025 279 ntBASIC6.14□□□□□ -1.43
COPAP53621 AP000894.4-201ENST00000610185 483 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC005156.1-201ENST00000613371 573 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC096861.1-201ENST00000616652 240 ntBASIC6.14□□□□□ -1.43
COPAP53621 AP005431.1-201ENST00000618479 319 ntBASIC6.14□□□□□ -1.43
COPAP53621 RNU6-368P-201ENST00000620928 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 RNU6-538P-201ENST00000622329 107 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC105105.5-201ENST00000622635 1294 ntBASIC6.14□□□□□ -1.43
COPAP53621 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.14□□□□□ -1.43
COPAP53621 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COPAP53621 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
COPAP53621 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 WDR95P-201ENST00000425638 1542 ntBASIC6.14□□□□□ -1.43
COPAP53621 AL359955.1-201ENST00000455242 3275 ntBASIC6.14□□□□□ -1.43
COPAP53621 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COPAP53621 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
COPAP53621 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 AC025470.1-201ENST00000510053 2032 ntBASIC6.13□□□□□ -1.43
COPAP53621 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 RAD1P1-201ENST00000231383 813 ntBASIC6.13□□□□□ -1.43
COPAP53621 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COPAP53621 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COPAP53621 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 AL035660.1-201ENST00000422041 222 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 MTCYBP32-201ENST00000427945 1084 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL365220.1-201ENST00000432923 399 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.13□□□□□ -1.43
COPAP53621 GEMIN2P1-201ENST00000454246 752 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 OR56A7P-201ENST00000524865 941 ntBASIC6.13□□□□□ -1.43
COPAP53621 AP000648.1-201ENST00000529682 397 ntBASIC6.13□□□□□ -1.43
COPAP53621 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 SNORD39.2-201ENST00000579995 76 ntBASIC6.13□□□□□ -1.43
COPAP53621 NPIPB1P-202ENST00000588786 828 ntBASIC6.13□□□□□ -1.43
COPAP53621 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.13□□□□□ -1.43
COPAP53621 AC027334.1-201ENST00000603257 310 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL031601.1-201ENST00000605702 394 ntBASIC6.13□□□□□ -1.43
COPAP53621 AF129408.1-201ENST00000608767 431 ntBASIC6.13□□□□□ -1.43
COPAP53621 Z95327.3-201ENST00000610385 572 ntBASIC6.13□□□□□ -1.43
COPAP53621 AC008147.4-201ENST00000617570 1204 ntBASIC6.13□□□□□ -1.43
COPAP53621 MIR6886-201ENST00000619864 61 ntBASIC6.13□□□□□ -1.43
COPAP53621 AL445528.2-201ENST00000620582 470 ntBASIC6.13□□□□□ -1.43
COPAP53621 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.13□□□□□ -1.43
COPAP53621 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 AL591135.1-201ENST00000401578 5914 ntBASIC6.13□□□□□ -1.43
COPAP53621 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COPAP53621 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COPAP53621 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COPAP53621 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COPAP53621 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPAP53621 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COPAP53621 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms