Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RN7SKP145-201ENST00000363291 303 ntBASIC6.48□□□□□ -1.37
NUP98P52948 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 AL772161.1-201ENST00000439130 476 ntBASIC6.48□□□□□ -1.37
NUP98P52948 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NUP98P52948 MED28P3-201ENST00000444288 531 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.48□□□□□ -1.37
NUP98P52948 MORF4L1P4-201ENST00000450245 976 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC012400.1-201ENST00000518452 381 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.48□□□□□ -1.37
NUP98P52948 AC079075.1-201ENST00000559543 878 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.48□□□□□ -1.37
NUP98P52948 AC209154.1-201ENST00000582156 337 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC234771.5-201ENST00000600161 514 ntBASIC6.48□□□□□ -1.37
NUP98P52948 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.48□□□□□ -1.37
NUP98P52948 AL356608.1-201ENST00000610034 820 ntBASIC6.48□□□□□ -1.37
NUP98P52948 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.48□□□□□ -1.37
NUP98P52948 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NUP98P52948 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 AC138907.8-201ENST00000623981 2256 ntBASIC6.47□□□□□ -1.37
NUP98P52948 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NUP98P52948 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 GTF2IP5-201ENST00000414608 731 ntBASIC6.47□□□□□ -1.37
NUP98P52948 AC019050.1-201ENST00000418508 492 ntBASIC6.47□□□□□ -1.37
NUP98P52948 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.47□□□□□ -1.37
NUP98P52948 RPL7P40-201ENST00000481703 745 ntBASIC6.47□□□□□ -1.37
NUP98P52948 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.47□□□□□ -1.37
NUP98P52948 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
NUP98P52948 AL139124.1-201ENST00000609123 421 ntBASIC6.47□□□□□ -1.37
NUP98P52948 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.47□□□□□ -1.37
NUP98P52948 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.47□□□□□ -1.37
NUP98P52948 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NUP98P52948 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.47□□□□□ -1.37
NUP98P52948 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NUP98P52948 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.46□□□□□ -1.37
NUP98P52948 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NUP98P52948 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.46□□□□□ -1.37
NUP98P52948 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.46□□□□□ -1.37
NUP98P52948 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NUP98P52948 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
NUP98P52948 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.46□□□□□ -1.37
NUP98P52948 MTND4LP17-201ENST00000414607 293 ntBASIC6.46□□□□□ -1.37
NUP98P52948 GJA6P-201ENST00000415117 1042 ntBASIC6.46□□□□□ -1.37
NUP98P52948 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.46□□□□□ -1.37
NUP98P52948 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.46□□□□□ -1.37
NUP98P52948 AC005618.4-201ENST00000625053 554 ntBASIC6.46□□□□□ -1.37
NUP98P52948 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NUP98P52948 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.46□□□□□ -1.37
NUP98P52948 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NUP98P52948 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP98P52948 ZNF812P-201ENST00000457674 1694 ntBASIC6.46□□□□□ -1.38
NUP98P52948 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
NUP98P52948 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP98P52948 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP98P52948 AC079298.1-201ENST00000625026 1619 ntBASIC6.46□□□□□ -1.38
NUP98P52948 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP98P52948 SNORA77-201ENST00000408716 125 ntBASIC6.46□□□□□ -1.38
NUP98P52948 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP98P52948 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 AC073264.2-201ENST00000448886 166 ntBASIC6.46□□□□□ -1.38
NUP98P52948 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP98P52948 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP98P52948 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP98P52948 AC068790.7-201ENST00000602347 528 ntBASIC6.46□□□□□ -1.38
NUP98P52948 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP98P52948 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP98P52948 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP98P52948 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.45□□□□□ -1.38
NUP98P52948 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NUP98P52948 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NUP98P52948 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.45□□□□□ -1.38
NUP98P52948 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.45□□□□□ -1.38
NUP98P52948 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 NPM1P40-201ENST00000412758 733 ntBASIC6.45□□□□□ -1.38
NUP98P52948 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP98P52948 RPL7AP61-201ENST00000443410 636 ntBASIC6.45□□□□□ -1.38
NUP98P52948 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NUP98P52948 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.45□□□□□ -1.38
NUP98P52948 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.45□□□□□ -1.38
NUP98P52948 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms