Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
MRE11P49959 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.95□□□□□ -1.3
MRE11P49959 MED28P4-201ENST00000433137 572 ntBASIC6.95□□□□□ -1.3
MRE11P49959 MTCO2P20-201ENST00000437339 673 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AL163193.1-201ENST00000444895 788 ntBASIC6.95□□□□□ -1.3
MRE11P49959 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 RANP2-201ENST00000456833 229 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AL122001.1-201ENST00000457027 370 ntBASIC6.95□□□□□ -1.3
MRE11P49959 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 RN7SL717P-201ENST00000478343 297 ntBASIC6.95□□□□□ -1.3
MRE11P49959 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 PRELID3BP6-201ENST00000503839 571 ntBASIC6.95□□□□□ -1.3
MRE11P49959 NAMPTP2-201ENST00000505629 1115 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AC010468.3-201ENST00000508225 458 ntBASIC6.95□□□□□ -1.3
MRE11P49959 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
MRE11P49959 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.95□□□□□ -1.3
MRE11P49959 AC084824.2-201ENST00000548906 345 ntBASIC6.95□□□□□ -1.3
MRE11P49959 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.95□□□□□ -1.3
MRE11P49959 AL359219.2-201ENST00000555184 348 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 AC005632.2-201ENST00000564271 828 ntBASIC6.95□□□□□ -1.3
MRE11P49959 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.95□□□□□ -1.3
MRE11P49959 MIR4660-201ENST00000583549 74 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 AC068620.3-201ENST00000602749 560 ntBASIC6.95□□□□□ -1.3
MRE11P49959 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.95□□□□□ -1.3
MRE11P49959 KATNBL1P5-201ENST00000605015 517 ntBASIC6.95□□□□□ -1.3
MRE11P49959 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 AL035425.4-201ENST00000624509 1063 ntBASIC6.95□□□□□ -1.3
MRE11P49959 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.95□□□□□ -1.3
MRE11P49959 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.95□□□□□ -1.3
MRE11P49959 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.95□□□□□ -1.3
MRE11P49959 AC012321.1-201ENST00000561622 1588 ntBASIC6.95□□□□□ -1.3
MRE11P49959 AC091305.2-201ENST00000624049 1576 ntBASIC6.95□□□□□ -1.3
MRE11P49959 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
MRE11P49959 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
MRE11P49959 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
MRE11P49959 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MRE11P49959 RNA5SP284-201ENST00000384547 118 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL050305.1-201ENST00000399993 1230 ntBASIC6.94□□□□□ -1.3
MRE11P49959 OR2X1P-201ENST00000421144 687 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL157884.1-201ENST00000424561 454 ntBASIC6.94□□□□□ -1.3
MRE11P49959 VDAC1P6-201ENST00000430062 855 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL512637.2-201ENST00000431287 1256 ntBASIC6.94□□□□□ -1.3
MRE11P49959 AL627308.1-201ENST00000435693 821 ntBASIC6.94□□□□□ -1.3
MRE11P49959 FRG2FP-204ENST00000453982 852 ntBASIC6.94□□□□□ -1.3
MRE11P49959 RPL12P39-201ENST00000455456 496 ntBASIC6.94□□□□□ -1.3
MRE11P49959 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.94□□□□□ -1.3
MRE11P49959 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 AC021146.10-201ENST00000515628 706 ntBASIC6.94□□□□□ -1.3
MRE11P49959 RNU6-1334P-201ENST00000516032 105 ntBASIC6.94□□□□□ -1.3
MRE11P49959 RNU6-1102P-201ENST00000516149 96 ntBASIC6.94□□□□□ -1.3
MRE11P49959 RN7SKP287-201ENST00000516546 266 ntBASIC6.94□□□□□ -1.3
MRE11P49959 RNA5SP230-201ENST00000517039 122 ntBASIC6.94□□□□□ -1.3
MRE11P49959 IGKV2-18-201ENST00000522607 343 ntBASIC6.94□□□□□ -1.3
MRE11P49959 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.94□□□□□ -1.3
MRE11P49959 AC007068.2-201ENST00000543168 395 ntBASIC6.94□□□□□ -1.3
MRE11P49959 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.94□□□□□ -1.3
MRE11P49959 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.94□□□□□ -1.3
MRE11P49959 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms