Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CASP4P49662 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CASP4P49662 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.82□□□□□ -1.48
CASP4P49662 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.82□□□□□ -1.48
CASP4P49662 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.82□□□□□ -1.48
CASP4P49662 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.82□□□□□ -1.48
CASP4P49662 OR3A2-201ENST00000408891 1076 ntBASIC5.82□□□□□ -1.48
CASP4P49662 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.82□□□□□ -1.48
CASP4P49662 AL136455.1-201ENST00000441083 1240 ntBASIC5.82□□□□□ -1.48
CASP4P49662 AC108161.1-201ENST00000461060 402 ntBASIC5.82□□□□□ -1.48
CASP4P49662 IMPA1P1-201ENST00000510718 842 ntBASIC5.82□□□□□ -1.48
CASP4P49662 RNU6-941P-201ENST00000516346 108 ntBASIC5.82□□□□□ -1.48
CASP4P49662 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.82□□□□□ -1.48
CASP4P49662 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.82□□□□□ -1.48
CASP4P49662 YWHABP2-201ENST00000540201 713 ntBASIC5.82□□□□□ -1.48
CASP4P49662 AC106730.2-201ENST00000566641 540 ntBASIC5.82□□□□□ -1.48
CASP4P49662 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.82□□□□□ -1.48
CASP4P49662 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.82□□□□□ -1.48
CASP4P49662 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CASP4P49662 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CASP4P49662 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.81□□□□□ -1.48
CASP4P49662 AC079298.1-201ENST00000625026 1619 ntBASIC5.81□□□□□ -1.48
CASP4P49662 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
CASP4P49662 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.81□□□□□ -1.48
CASP4P49662 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CASP4P49662 RN7SKP160-201ENST00000363804 340 ntBASIC5.81□□□□□ -1.48
CASP4P49662 RN7SKP269-201ENST00000365545 319 ntBASIC5.81□□□□□ -1.48
CASP4P49662 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 RNA5SP339-201ENST00000390987 122 ntBASIC5.81□□□□□ -1.48
CASP4P49662 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 CFL1P1-202ENST00000432948 411 ntBASIC5.81□□□□□ -1.48
CASP4P49662 RPL19P16-201ENST00000433839 588 ntBASIC5.81□□□□□ -1.48
CASP4P49662 RPSAP41-201ENST00000439695 860 ntBASIC5.81□□□□□ -1.48
CASP4P49662 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.81□□□□□ -1.48
CASP4P49662 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 SIAH1P1-201ENST00000479411 923 ntBASIC5.81□□□□□ -1.48
CASP4P49662 RPS4XP1-201ENST00000482189 787 ntBASIC5.81□□□□□ -1.48
CASP4P49662 RN7SL423P-201ENST00000486202 304 ntBASIC5.81□□□□□ -1.48
CASP4P49662 AC108693.1-201ENST00000496068 432 ntBASIC5.81□□□□□ -1.48
CASP4P49662 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.81□□□□□ -1.48
CASP4P49662 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.81□□□□□ -1.48
CASP4P49662 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.81□□□□□ -1.48
CASP4P49662 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.81□□□□□ -1.48
CASP4P49662 AC016839.1-201ENST00000578162 867 ntBASIC5.81□□□□□ -1.48
CASP4P49662 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.81□□□□□ -1.48
CASP4P49662 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CASP4P49662 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.81□□□□□ -1.48
CASP4P49662 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CASP4P49662 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CASP4P49662 AL034549.2-201ENST00000618285 3373 ntBASIC5.8□□□□□ -1.48
CASP4P49662 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.8□□□□□ -1.48
CASP4P49662 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CASP4P49662 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms