Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 MTCO3P27-201ENST00000514397 196 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC016550.3-201ENST00000515706 767 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 C1DP5-201ENST00000525775 383 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC135983.3-201ENST00000528049 1226 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC084851.2-201ENST00000530377 364 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC008055.1-201ENST00000547032 609 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 GLRXP2-201ENST00000555594 321 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AL121594.4-201ENST00000556211 1196 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 MIR4732-201ENST00000581873 76 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC005726.4-201ENST00000582858 458 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC026898.1-201ENST00000586404 571 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 QTRT1P1-201ENST00000604344 1078 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 RNU6-84P-201ENST00000607737 102 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXA1P49639 MIR6133-201ENST00000617057 108 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 MIR6849-201ENST00000618543 69 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AC015722.2-201ENST00000622210 551 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC090772.4-201ENST00000623599 362 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 OR4G3P-201ENST00000633500 913 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA1P49639 AC120338.1-201ENST00000625074 1541 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 AL034370.1-201ENST00000397254 1590 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 MAPK10-349ENST00000641767 3661 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA1P49639 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HOXA1P49639 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
HOXA1P49639 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA1P49639 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 DDX18P6-201ENST00000450119 1997 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 YWHAZP4-201ENST00000392459 708 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 SNORA77.2-201ENST00000408571 112 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 RNU4-27P-201ENST00000410889 139 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 PTCD2P2-201ENST00000415579 1095 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AL360013.1-201ENST00000419031 858 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXA1P49639 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 TMX2P1-201ENST00000436507 708 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 WDR82P2-201ENST00000444540 928 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 MOB1AP2-201ENST00000446060 614 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 CCRL1P1-201ENST00000449542 1053 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 HIGD1AP16-201ENST00000450986 258 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXA1P49639 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 AP003385.3-201ENST00000472498 287 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA1P49639 RPL12P31-201ENST00000478433 450 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 RN7SL502P-201ENST00000481857 290 ntBASIC4.85□□□□□ -1.63
HOXA1P49639 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA1P49639 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA1P49639 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA1P49639 KHDC1P1-201ENST00000511053 508 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms