Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 MUC2-202ENST00000613187 4845 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NKX2-1P43699 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-1P43699 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-1P43699 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 SNRPEP6-201ENST00000407465 277 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 ARL2BPP3-201ENST00000421226 480 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC009784.1-201ENST00000426484 460 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 RPSAP65-201ENST00000429660 595 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC108479.1-201ENST00000431142 427 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 PSMD10P2-201ENST00000432890 672 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC128677.1-201ENST00000436016 442 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AL645936.1-201ENST00000441979 518 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 RPS7P3-201ENST00000443360 580 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC02210-201ENST00000444561 288 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC004129.2-201ENST00000457229 287 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-1P43699 RN7SL39P-201ENST00000462264 297 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC021205.1-201ENST00000468797 348 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC108729.2-201ENST00000476543 840 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC116562.1-201ENST00000485355 781 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC093763.2-201ENST00000505334 1223 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC105384.2-201ENST00000508433 640 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-1P43699 VTA1P2-201ENST00000520205 911 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC138832.1-201ENST00000522871 556 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 OR4A17P-201ENST00000526032 904 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-1P43699 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC093014.1-201ENST00000548926 724 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-1P43699 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-1P43699 RN7SL66P-201ENST00000582099 264 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX2-1P43699 MIR212-201ENST00000586026 110 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC006116.7-201ENST00000590141 756 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC018645.2-201ENST00000609151 472 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AL163051.2-201ENST00000618976 735 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC074140.1-201ENST00000621617 208 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 AC073488.6-201ENST00000632293 754 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-1P43699 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-1P43699 ZNF733P-202ENST00000444809 1573 ntBASIC4.72□□□□□ -1.65
NKX2-1P43699 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-1P43699 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms