Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.58□□□□□ -1.52
HTTP42858 AC004836.1-201ENST00000623032 634 ntBASIC5.58□□□□□ -1.52
HTTP42858 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HTTP42858 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.58□□□□□ -1.52
HTTP42858 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.58□□□□□ -1.52
HTTP42858 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HTTP42858 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 AC114755.2-201ENST00000413520 361 ntBASIC5.58□□□□□ -1.52
HTTP42858 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.58□□□□□ -1.52
HTTP42858 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.58□□□□□ -1.52
HTTP42858 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.58□□□□□ -1.52
HTTP42858 BNIP3P11-201ENST00000603878 563 ntBASIC5.58□□□□□ -1.52
HTTP42858 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HTTP42858 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
HTTP42858 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HTTP42858 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 RPL23AP93-201ENST00000440847 484 ntBASIC5.57□□□□□ -1.52
HTTP42858 PRSS3P4-201ENST00000453323 162 ntBASIC5.57□□□□□ -1.52
HTTP42858 RN7SL244P-201ENST00000493405 297 ntBASIC5.57□□□□□ -1.52
HTTP42858 AC106806.2-201ENST00000509365 500 ntBASIC5.57□□□□□ -1.52
HTTP42858 RNU1-45P-201ENST00000517191 141 ntBASIC5.57□□□□□ -1.52
HTTP42858 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.57□□□□□ -1.52
HTTP42858 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 MIR6853-201ENST00000619642 74 ntBASIC5.57□□□□□ -1.52
HTTP42858 AP000843.1-201ENST00000624880 701 ntBASIC5.57□□□□□ -1.52
HTTP42858 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HTTP42858 CYCSP34-201ENST00000458172 304 ntBASIC5.57□□□□□ -1.52
HTTP42858 SCARNA10-201ENST00000459255 330 ntBASIC5.57□□□□□ -1.52
HTTP42858 OR2A3P-201ENST00000493774 953 ntBASIC5.57□□□□□ -1.52
HTTP42858 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HTTP42858 AP000889.1-201ENST00000530968 660 ntBASIC5.57□□□□□ -1.52
HTTP42858 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.57□□□□□ -1.52
HTTP42858 RPL7P50-201ENST00000600588 727 ntBASIC5.57□□□□□ -1.52
HTTP42858 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.57□□□□□ -1.52
HTTP42858 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 FP325330.3-201ENST00000623760 9537 ntBASIC5.57□□□□□ -1.52
HTTP42858 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HTTP42858 RNF10P1-201ENST00000418589 369 ntBASIC5.57□□□□□ -1.52
HTTP42858 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.57□□□□□ -1.52
HTTP42858 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.57□□□□□ -1.52
HTTP42858 AC023818.1-201ENST00000498379 384 ntBASIC5.57□□□□□ -1.52
HTTP42858 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.57□□□□□ -1.52
HTTP42858 AC090948.1-201ENST00000607464 549 ntBASIC5.57□□□□□ -1.52
HTTP42858 AP001885.1-201ENST00000621658 558 ntBASIC5.57□□□□□ -1.52
HTTP42858 RNA5SP196-201ENST00000625967 102 ntBASIC5.57□□□□□ -1.52
HTTP42858 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 SAMMSON-210ENST00000641260 1308 ntBASIC5.56□□□□□ -1.52
HTTP42858 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 NCLP2-201ENST00000416078 1462 ntBASIC5.56□□□□□ -1.52
HTTP42858 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 AC092821.2-201ENST00000545710 2042 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms