Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL034549.2-201ENST00000618285 3373 ntBASIC6.94□□□□□ -1.3
COL15A1P39059 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.94□□□□□ -1.3
COL15A1P39059 AL163152.1-201ENST00000642001 374 ntBASIC6.94□□□□□ -1.3
COL15A1P39059 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL15A1P39059 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 KYNUP3-201ENST00000574386 1341 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 AC022417.1-201ENST00000624768 1303 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL15A1P39059 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.93□□□□□ -1.3
COL15A1P39059 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 OR4F13P-202ENST00000560066 2054 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL15A1P39059 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 MTHFD2P5-201ENST00000320415 844 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL15A1P39059 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 SNORA40.4-201ENST00000390971 128 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 AC096921.1-201ENST00000411661 375 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 RPSAP35-201ENST00000413753 818 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL15A1P39059 SETP10-201ENST00000424368 814 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 RPS6P14-201ENST00000425165 719 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 MORF4L2P1-201ENST00000503761 858 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 AC021733.2-201ENST00000518830 497 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC018558.5-201ENST00000565840 952 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC015712.7-201ENST00000615211 635 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.93□□□□□ -1.3
COL15A1P39059 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL15A1P39059 AL355488.2-201ENST00000609909 2850 ntBASIC6.93□□□□□ -1.3
COL15A1P39059 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL15A1P39059 AL359955.1-201ENST00000455242 3275 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL15A1P39059 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL15A1P39059 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL15A1P39059 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL15A1P39059 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 RN7SKP104-201ENST00000362605 328 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 RN7SKP103-201ENST00000363848 320 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.92□□□□□ -1.3
COL15A1P39059 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 AC093162.1-201ENST00000419682 124 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 RIMKLBP2-201ENST00000424737 654 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC093655.2-201ENST00000425735 631 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 RPL34P27-201ENST00000428810 349 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 AZGP1P2-201ENST00000454506 345 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC021106.1-201ENST00000509020 1058 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 GAPDHP62-201ENST00000515313 990 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.92□□□□□ -1.3
COL15A1P39059 HNRNPRP2-201ENST00000528421 743 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC024940.3-201ENST00000538551 316 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC122688.1-201ENST00000541494 223 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AP005403.1-201ENST00000579720 229 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC095055.1-201ENST00000603472 1113 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC091953.3-201ENST00000623220 236 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AL356094.1-201ENST00000624663 1212 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.92□□□□□ -1.3
COL15A1P39059 AC074101.1-201ENST00000637861 241 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 AL139254.3-201ENST00000641097 674 ntBASIC6.92□□□□□ -1.3
COL15A1P39059 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.92□□□□□ -1.3
COL15A1P39059 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL15A1P39059 CASC19-281ENST00000642118 1554 ntBASIC6.91□□□□□ -1.3
COL15A1P39059 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.91□□□□□ -1.3
COL15A1P39059 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.91□□□□□ -1.3
COL15A1P39059 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL15A1P39059 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms