Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SCARNA21.2-201ENST00000516600 166 ntBASIC6.13□□□□□ -1.43
SLC6A4P31645 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC6A4P31645 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC6A4P31645 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC6A4P31645 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC6A4P31645 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 DUXAP3-201ENST00000603616 594 ntBASIC6.13□□□□□ -1.43
SLC6A4P31645 AL450336.1-201ENST00000605180 586 ntBASIC6.13□□□□□ -1.43
SLC6A4P31645 AL365400.2-201ENST00000605604 902 ntBASIC6.13□□□□□ -1.43
SLC6A4P31645 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.13□□□□□ -1.43
SLC6A4P31645 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC6A4P31645 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SLC6A4P31645 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SLC6A4P31645 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.13□□□□□ -1.43
SLC6A4P31645 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SLC6A4P31645 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.13□□□□□ -1.43
SLC6A4P31645 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 AC078880.4-201ENST00000617627 1749 ntBASIC6.13□□□□□ -1.43
SLC6A4P31645 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.13□□□□□ -1.43
SLC6A4P31645 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SLC6A4P31645 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SLC6A4P31645 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SLC6A4P31645 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SLC6A4P31645 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SLC6A4P31645 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC023490.2-201ENST00000359859 470 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 RNA5SP211-201ENST00000365516 117 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL451142.1-201ENST00000375867 775 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 RNU6-207P-201ENST00000384137 107 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AL360271.1-201ENST00000395679 510 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL356317.1-201ENST00000396110 1436 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 RPL5P19-201ENST00000404228 893 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL035660.1-201ENST00000422041 222 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 NANOGP5-201ENST00000424456 877 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A4P31645 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC099677.3-201ENST00000427081 395 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC016027.5-201ENST00000427227 210 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AP006222.1-205ENST00000450734 457 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL035690.1-201ENST00000490892 383 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 PSMA2P2-201ENST00000504319 686 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A4P31645 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC6A4P31645 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC021106.1-201ENST00000509020 1058 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 UGT2B24P-201ENST00000514441 1597 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 SNORD46.2-201ENST00000516021 102 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 UBTFL10-201ENST00000528532 562 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AP000648.1-201ENST00000529682 397 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A4P31645 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 MTCYBP23-201ENST00000558717 1102 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC090888.2-201ENST00000559765 1144 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 SNX18P3-202ENST00000565670 1750 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC021483.2-201ENST00000567415 758 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 MIR3614-201ENST00000581261 86 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 CBX3P2-202ENST00000583365 535 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AC119501.1-201ENST00000603646 475 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL031601.1-201ENST00000605702 394 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AL157392.4-201ENST00000609756 345 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A4P31645 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A4P31645 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A4P31645 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A4P31645 PARP4P2-201ENST00000446672 3326 ntBASIC6.12□□□□□ -1.43
SLC6A4P31645 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A4P31645 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SLC6A4P31645 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SLC6A4P31645 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A4P31645 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms