Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.44□□□□□ -1.38
POLR2AP24928 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
POLR2AP24928 AL671309.1-201ENST00000603750 544 ntBASIC6.44□□□□□ -1.38
POLR2AP24928 AL356752.1-201ENST00000615844 593 ntBASIC6.44□□□□□ -1.38
POLR2AP24928 AC010435.1-201ENST00000623353 1177 ntBASIC6.44□□□□□ -1.38
POLR2AP24928 AC068787.1-201ENST00000623908 691 ntBASIC6.44□□□□□ -1.38
POLR2AP24928 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
POLR2AP24928 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.44□□□□□ -1.38
POLR2AP24928 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.44□□□□□ -1.38
POLR2AP24928 AC233968.1-201ENST00000611212 1300 ntBASIC6.44□□□□□ -1.38
POLR2AP24928 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.43□□□□□ -1.38
POLR2AP24928 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
POLR2AP24928 SNORA17.1-201ENST00000362945 126 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 GAPDHP15-201ENST00000398586 975 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 SNORA81-201ENST00000408493 178 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 RNA5SP487-201ENST00000410186 122 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 RNU6-564P-201ENST00000410983 104 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.43□□□□□ -1.38
POLR2AP24928 snoU109.3-201ENST00000459477 145 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 NDUFA5P9-201ENST00000472609 340 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.43□□□□□ -1.38
POLR2AP24928 MTND2P32-201ENST00000521584 1038 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.43□□□□□ -1.38
POLR2AP24928 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 MTND1P24-201ENST00000552175 861 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 MIR4270-201ENST00000581799 70 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 OR1AB1P-201ENST00000585564 761 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AC011447.4-201ENST00000587562 111 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AC022079.1-201ENST00000621546 602 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 MTND5P12-201ENST00000502851 1449 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.43□□□□□ -1.38
POLR2AP24928 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 AC018765.1-201ENST00000623357 3446 ntBASIC6.43□□□□□ -1.38
POLR2AP24928 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
POLR2AP24928 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 AL034549.2-201ENST00000618285 3373 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 RNA5SP91-201ENST00000390902 119 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 HMGB3P5-201ENST00000428894 612 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 USP9YP9-201ENST00000429406 715 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.42□□□□□ -1.38
POLR2AP24928 CETN4P-201ENST00000432407 469 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 SETP8-201ENST00000435341 628 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.42□□□□□ -1.38
POLR2AP24928 TPTE2P3-201ENST00000441562 1189 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AC112498.1-201ENST00000444401 332 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 TRBV5-2-201ENST00000489095 273 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 Y_RNA.717-201ENST00000517106 92 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.42□□□□□ -1.38
POLR2AP24928 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 AC018645.2-201ENST00000609151 472 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.42□□□□□ -1.38
POLR2AP24928 AP003485.1-201ENST00000625093 753 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 AL445984.1-201ENST00000637834 659 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AC074101.1-201ENST00000637861 241 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 AC068870.1-201ENST00000563737 2455 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
POLR2AP24928 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 MTND4P9-201ENST00000507819 1346 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 AP003170.5-201ENST00000397185 335 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 DHFRP5-201ENST00000406944 564 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 MTND4LP7-201ENST00000431728 294 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AL049745.1-201ENST00000433953 286 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
POLR2AP24928 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.42□□□□□ -1.38
POLR2AP24928 TPT1P13-201ENST00000449760 499 ntBASIC6.42□□□□□ -1.38
POLR2AP24928 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.42□□□□□ -1.38
POLR2AP24928 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms