Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 COX4I1P1-201ENST00000554239 509 ntBASIC8.81□□□□□ -1
PTPREP23469 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.81□□□□□ -1
PTPREP23469 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.81□□□□□ -1
PTPREP23469 NIFKP8-201ENST00000560500 874 ntBASIC8.81□□□□□ -1
PTPREP23469 UBE2CP4-201ENST00000561405 535 ntBASIC8.81□□□□□ -1
PTPREP23469 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
PTPREP23469 MIR1273F-201ENST00000580581 99 ntBASIC8.81□□□□□ -1
PTPREP23469 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC8.81□□□□□ -1
PTPREP23469 AC004852.1-201ENST00000605206 154 ntBASIC8.81□□□□□ -1
PTPREP23469 AC018695.5-201ENST00000605872 315 ntBASIC8.81□□□□□ -1
PTPREP23469 AL136985.2-201ENST00000607372 535 ntBASIC8.81□□□□□ -1
PTPREP23469 AC091925.1-201ENST00000623204 462 ntBASIC8.81□□□□□ -1
PTPREP23469 AC093591.3-201ENST00000634516 308 ntBASIC8.81□□□□□ -1
PTPREP23469 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.81□□□□□ -1
PTPREP23469 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PTPREP23469 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
PTPREP23469 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
PTPREP23469 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.81□□□□□ -1
PTPREP23469 DDX50P1-201ENST00000438163 2400 ntBASIC8.81□□□□□ -1
PTPREP23469 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.81□□□□□ -1
PTPREP23469 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPREP23469 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.8□□□□□ -1
PTPREP23469 EEF1A1P42-201ENST00000613436 1331 ntBASIC8.8□□□□□ -1
PTPREP23469 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 AC008555.1-201ENST00000561778 2757 ntBASIC8.8□□□□□ -1
PTPREP23469 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.8□□□□□ -1
PTPREP23469 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 MAPK10-290ENST00000641237 2826 ntBASIC8.8□□□□□ -1
PTPREP23469 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 RNU6-185P-201ENST00000384421 107 ntBASIC8.8□□□□□ -1
PTPREP23469 PTMAP8-201ENST00000397729 342 ntBASIC8.8□□□□□ -1
PTPREP23469 AC025750.1-201ENST00000399891 379 ntBASIC8.8□□□□□ -1
PTPREP23469 AL139100.1-201ENST00000408001 498 ntBASIC8.8□□□□□ -1
PTPREP23469 AL359704.1-201ENST00000411586 781 ntBASIC8.8□□□□□ -1
PTPREP23469 AC127537.1-201ENST00000418183 748 ntBASIC8.8□□□□□ -1
PTPREP23469 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.8□□□□□ -1
PTPREP23469 GAPDHP73-201ENST00000423411 1007 ntBASIC8.8□□□□□ -1
PTPREP23469 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.8□□□□□ -1
PTPREP23469 AC127526.2-201ENST00000426436 775 ntBASIC8.8□□□□□ -1
PTPREP23469 RPL7P56-201ENST00000429441 717 ntBASIC8.8□□□□□ -1
PTPREP23469 MTCYBP9-201ENST00000431021 303 ntBASIC8.8□□□□□ -1
PTPREP23469 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 HMGB3P12-201ENST00000438745 556 ntBASIC8.8□□□□□ -1
PTPREP23469 MTND6P18-201ENST00000439477 513 ntBASIC8.8□□□□□ -1
PTPREP23469 CBWD4P-201ENST00000445695 655 ntBASIC8.8□□□□□ -1
PTPREP23469 TREML3P-201ENST00000457327 501 ntBASIC8.8□□□□□ -1
PTPREP23469 AC079768.1-201ENST00000503181 711 ntBASIC8.8□□□□□ -1
PTPREP23469 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.8□□□□□ -1
PTPREP23469 SNX5P1-201ENST00000505757 1041 ntBASIC8.8□□□□□ -1
PTPREP23469 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.8□□□□□ -1
PTPREP23469 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC8.8□□□□□ -1
PTPREP23469 OR4C1P-201ENST00000530880 937 ntBASIC8.8□□□□□ -1
PTPREP23469 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.8□□□□□ -1
PTPREP23469 AC027796.1-201ENST00000575593 512 ntBASIC8.8□□□□□ -1
PTPREP23469 AC009977.1-201ENST00000586015 570 ntBASIC8.8□□□□□ -1
PTPREP23469 AC016629.2-201ENST00000597341 199 ntBASIC8.8□□□□□ -1
PTPREP23469 AL390058.1-201ENST00000603834 629 ntBASIC8.8□□□□□ -1
PTPREP23469 AL391646.1-201ENST00000603860 190 ntBASIC8.8□□□□□ -1
PTPREP23469 AC108451.2-201ENST00000603875 538 ntBASIC8.8□□□□□ -1
PTPREP23469 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.8□□□□□ -1
PTPREP23469 CTHRC1P1-201ENST00000605383 469 ntBASIC8.8□□□□□ -1
PTPREP23469 AC012510.1-201ENST00000607946 759 ntBASIC8.8□□□□□ -1
PTPREP23469 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 AC244100.4-201ENST00000617747 388 ntBASIC8.8□□□□□ -1
PTPREP23469 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.8□□□□□ -1
PTPREP23469 AC093909.6-201ENST00000624757 775 ntBASIC8.8□□□□□ -1
PTPREP23469 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
PTPREP23469 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
PTPREP23469 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 AC100871.1-201ENST00000507871 1456 ntBASIC8.8□□□□□ -1
PTPREP23469 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 AC007923.2-201ENST00000584218 1591 ntBASIC8.8□□□□□ -1
PTPREP23469 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
PTPREP23469 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.8□□□□□ -1
PTPREP23469 MAPK10-377ENST00000642006 2752 ntBASIC8.8□□□□□ -1
PTPREP23469 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.8□□□□□ -1
PTPREP23469 AC008498.2-201ENST00000624033 2322 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms