Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPL7P16-201ENST00000479738 738 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC107398.1-201ENST00000486904 505 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC022206.1-201ENST00000495947 347 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC023050.1-201ENST00000498198 304 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC092593.2-201ENST00000513866 913 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 RFPL4AP3-201ENST00000515267 345 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AP001804.2-201ENST00000533932 910 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AL591767.3-201ENST00000554632 525 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC068020.1-201ENST00000594215 661 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC130352.1-201ENST00000602979 661 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC024257.5-201ENST00000612739 531 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 FCF1P9-201ENST00000412546 282 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC023128.2-201ENST00000420880 1223 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 DUTP4-201ENST00000424782 475 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ETF1P3-201ENST00000430422 1160 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 IGLV3-4-201ENST00000432300 244 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 HMGB3P6-201ENST00000444896 598 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 OTX2P1-201ENST00000450956 354 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC027673.1-201ENST00000456245 405 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 RPS20P4-201ENST00000461659 355 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 MTAPP1-201ENST00000489154 819 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC025459.1-201ENST00000504072 156 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 PABPC1P1-201ENST00000506347 591 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC024451.1-201ENST00000508013 779 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC020937.1-201ENST00000519677 1013 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 GTF2IP11-201ENST00000526931 420 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC006518.2-201ENST00000542513 940 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC092332.1-201ENST00000563684 829 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC023813.2-201ENST00000564321 469 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA70D-201ENST00000578836 135 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA74.4-201ENST00000607595 199 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AL138478.1-201ENST00000612252 832 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC129915.3-201ENST00000634128 948 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 MIR1322-201ENST00000638013 71 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AL049737.1-201ENST00000413920 1403 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 NBPF8-201ENST00000583271 5330 ntBASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CSB-PGBD3P0DP91 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SNORD113-6-201ENST00000363345 75 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 RNU4-51P-201ENST00000364206 140 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 MIR130B-202ENST00000385018 82 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 SNORA17A-201ENST00000391185 133 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC019178.2-201ENST00000423595 505 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 CHEK2P5-201ENST00000423877 246 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 ELOCP8-201ENST00000439309 332 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AC092393.1-201ENST00000439625 742 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 ELOCP15-201ENST00000442090 332 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 AL590004.3-202ENST00000445883 451 ntBASIC8.59□□□□□ -1.03
CSB-PGBD3P0DP91 UBE2V1P7-201ENST00000446395 340 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms