Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPTA1P02549 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.97□□□□□ -1.61
SPTA1P02549 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SPTA1P02549 AC015813.6-201ENST00000624409 5808 ntBASIC4.96□□□□□ -1.61
SPTA1P02549 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SPTA1P02549 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SPTA1P02549 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.96□□□□□ -1.61
SPTA1P02549 RNU1-149P-201ENST00000390870 161 ntBASIC4.96□□□□□ -1.61
SPTA1P02549 HMGB1P40-201ENST00000525121 540 ntBASIC4.96□□□□□ -1.61
SPTA1P02549 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.96□□□□□ -1.61
SPTA1P02549 AC114876.1-201ENST00000490962 1366 ntBASIC4.96□□□□□ -1.61
SPTA1P02549 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.96□□□□□ -1.61
SPTA1P02549 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.96□□□□□ -1.61
SPTA1P02549 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SPTA1P02549 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.96□□□□□ -1.62
SPTA1P02549 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SPTA1P02549 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SPTA1P02549 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SPTA1P02549 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.96□□□□□ -1.62
SPTA1P02549 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SPTA1P02549 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 AC011504.1-201ENST00000623331 4103 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SPTA1P02549 RNU1-24P-201ENST00000364285 165 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SPTA1P02549 AC211486.3-201ENST00000412694 621 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 AC015977.1-201ENST00000418887 292 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SPTA1P02549 OR7E158P-201ENST00000524483 910 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 AC137695.1-201ENST00000604126 489 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 AC009597.2-201ENST00000604659 592 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SPTA1P02549 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 AL031123.3-201ENST00000623345 1837 ntBASIC4.96□□□□□ -1.62
SPTA1P02549 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPTA1P02549 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 AC022164.1-201ENST00000568767 2673 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC011379.1-201ENST00000508713 3025 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SPTA1P02549 RNA5SP388-201ENST00000362584 119 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SPTA1P02549 VN1R21P-201ENST00000426703 765 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC090114.3-201ENST00000479267 829 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC024940.3-201ENST00000538551 316 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 OR4H6P-201ENST00000563771 921 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AC027334.1-201ENST00000603257 310 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 MIPEPP2-201ENST00000422560 1819 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SPTA1P02549 ASNSP1-204ENST00000641977 1664 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC079741.1-201ENST00000321498 212 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 RNU1-43P-201ENST00000365052 165 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 RPS3AP38-201ENST00000435889 763 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 DSTNP2-201ENST00000504533 515 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 IGKV1-32-201ENST00000519290 311 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.95□□□□□ -1.62
SPTA1P02549 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.95□□□□□ -1.62
SPTA1P02549 MIR4298-201ENST00000584380 73 ntBASIC4.95□□□□□ -1.62
SPTA1P02549 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.95□□□□□ -1.62
SPTA1P02549 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPTA1P02549 LINC01963-201ENST00000562038 3148 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms