Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 GAPDHP15-201ENST00000398586 975 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 RNF10P1-201ENST00000418589 369 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 BX119904.1-201ENST00000432026 348 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 NDUFA5P10-201ENST00000432147 357 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 PTP4A1P3-201ENST00000433661 420 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 DNAJA1P5-201ENST00000440278 943 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC020779.1-201ENST00000478757 796 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 OR7E157P-201ENST00000494376 911 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 PFN1P8-201ENST00000497012 543 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 RNA5SP271-201ENST00000516700 88 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC005363.1-201ENST00000530779 351 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC139697.1-201ENST00000548429 745 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.3□□□□□ -1.56
NKX2-2O95096 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC025857.2-201ENST00000602711 238 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AL138895.2-201ENST00000603019 178 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC084373.1-201ENST00000603311 235 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 AC034236.3-201ENST00000605999 461 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX2-2O95096 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX2-2O95096 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 TCP1P3-201ENST00000414406 1498 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AP000547.3-204ENST00000588548 2523 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC011933.2-201ENST00000578539 2790 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 SNORA63.3-201ENST00000362682 132 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC087752.1-201ENST00000391360 558 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 ATP5F1P6-201ENST00000402768 767 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 RNU2-22P-201ENST00000411266 212 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC115283.1-201ENST00000427353 400 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AL022331.1-201ENST00000429025 477 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC023512.1-201ENST00000444513 499 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 HLA-DPA3-207ENST00000454398 229 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC011476.1-201ENST00000466725 307 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC136777.2-201ENST00000522979 358 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AP003102.1-201ENST00000525638 661 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 UBTFL9-201ENST00000534504 1148 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC025918.2-201ENST00000558683 763 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AGGF1P7-201ENST00000562369 913 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-2O95096 AC027216.1-201ENST00000577726 685 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 DHFRP1-201ENST00000579682 559 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-2O95096 AF230666.2-201ENST00000602328 725 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 AC073137.1-201ENST00000605636 634 ntBASIC5.29□□□□□ -1.56
NKX2-2O95096 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms